Protein–RNA interactions for Protein: Q9Y5H1

PCDHGA2, Protocadherin gamma-A2, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA2Q9Y5H1 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
PCDHGA2Q9Y5H1 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA2Q9Y5H1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA2Q9Y5H1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC23.86■■□□□ 1.41
PCDHGA2Q9Y5H1 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHGA2Q9Y5H1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.86■■□□□ 1.41
PCDHGA2Q9Y5H1 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
PCDHGA2Q9Y5H1 UNC93B3-201ENST00000308076 687 ntBASIC23.85■■□□□ 1.41
PCDHGA2Q9Y5H1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.85■■□□□ 1.41
PCDHGA2Q9Y5H1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA2Q9Y5H1 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA2Q9Y5H1 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
PCDHGA2Q9Y5H1 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC23.84■■□□□ 1.41
PCDHGA2Q9Y5H1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PCDHGA2Q9Y5H1 EDA-201ENST00000338901 1233 ntBASIC23.84■■□□□ 1.41
PCDHGA2Q9Y5H1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.84■■□□□ 1.41
PCDHGA2Q9Y5H1 AL136162.1-201ENST00000607711 1078 ntBASIC23.84■■□□□ 1.41
PCDHGA2Q9Y5H1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PCDHGA2Q9Y5H1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PCDHGA2Q9Y5H1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
PCDHGA2Q9Y5H1 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.83■■□□□ 1.41
PCDHGA2Q9Y5H1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA2Q9Y5H1 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA2Q9Y5H1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PCDHGA2Q9Y5H1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC23.83■■□□□ 1.4
PCDHGA2Q9Y5H1 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.4
PCDHGA2Q9Y5H1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
PCDHGA2Q9Y5H1 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PCDHGA2Q9Y5H1 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 AL355001.2-201ENST00000620617 1191 ntBASIC23.81■■□□□ 1.4
PCDHGA2Q9Y5H1 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PCDHGA2Q9Y5H1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.79■■□□□ 1.4
PCDHGA2Q9Y5H1 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA2Q9Y5H1 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA2Q9Y5H1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PCDHGA2Q9Y5H1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDHGA2Q9Y5H1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
PCDHGA2Q9Y5H1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.78■■□□□ 1.4
PCDHGA2Q9Y5H1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDHGA2Q9Y5H1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.78■■□□□ 1.4
PCDHGA2Q9Y5H1 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.78■■□□□ 1.4
PCDHGA2Q9Y5H1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
PCDHGA2Q9Y5H1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.76■■□□□ 1.39
PCDHGA2Q9Y5H1 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 AC105265.2-201ENST00000467189 838 ntBASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 MIR6821-201ENST00000617625 74 ntBASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDHGA2Q9Y5H1 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDHGA2Q9Y5H1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms