Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC32.44■■■□□ 2.78
NINLQ9Y2I6 AC090877.2-201ENST00000558441 1738 ntBASIC32.44■■■□□ 2.78
NINLQ9Y2I6 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC32.44■■■□□ 2.78
NINLQ9Y2I6 SENP5-202ENST00000419026 973 ntTSL 3 BASIC32.44■■■□□ 2.78
NINLQ9Y2I6 GRAMD4P7-201ENST00000578182 1232 ntBASIC32.44■■■□□ 2.78
NINLQ9Y2I6 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
NINLQ9Y2I6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NINLQ9Y2I6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC32.43■■■□□ 2.78
NINLQ9Y2I6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NINLQ9Y2I6 KRT16P3-201ENST00000439127 1283 ntBASIC32.43■■■□□ 2.78
NINLQ9Y2I6 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC32.43■■■□□ 2.78
NINLQ9Y2I6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC32.43■■■□□ 2.78
NINLQ9Y2I6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NINLQ9Y2I6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
NINLQ9Y2I6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
NINLQ9Y2I6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
NINLQ9Y2I6 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
NINLQ9Y2I6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NINLQ9Y2I6 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC32.4■■■□□ 2.78
NINLQ9Y2I6 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NINLQ9Y2I6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
NINLQ9Y2I6 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NINLQ9Y2I6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC32.39■■■□□ 2.78
NINLQ9Y2I6 AC008406.3-201ENST00000620001 1374 ntBASIC32.38■■■□□ 2.77
NINLQ9Y2I6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC32.38■■■□□ 2.77
NINLQ9Y2I6 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
NINLQ9Y2I6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC32.37■■■□□ 2.77
NINLQ9Y2I6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC32.37■■■□□ 2.77
NINLQ9Y2I6 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC32.37■■■□□ 2.77
NINLQ9Y2I6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NINLQ9Y2I6 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
NINLQ9Y2I6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC32.36■■■□□ 2.77
NINLQ9Y2I6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC32.36■■■□□ 2.77
NINLQ9Y2I6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC32.36■■■□□ 2.77
NINLQ9Y2I6 TK2-202ENST00000417693 1046 ntTSL 2 BASIC32.35■■■□□ 2.77
NINLQ9Y2I6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC32.35■■■□□ 2.77
NINLQ9Y2I6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC32.35■■■□□ 2.77
NINLQ9Y2I6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NINLQ9Y2I6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
NINLQ9Y2I6 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC32.34■■■□□ 2.77
NINLQ9Y2I6 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
NINLQ9Y2I6 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC32.34■■■□□ 2.77
NINLQ9Y2I6 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
NINLQ9Y2I6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
NINLQ9Y2I6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
NINLQ9Y2I6 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC32.33■■■□□ 2.77
NINLQ9Y2I6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC32.33■■■□□ 2.77
NINLQ9Y2I6 TSPY9P-201ENST00000440215 945 ntBASIC32.33■■■□□ 2.77
NINLQ9Y2I6 TSPY11P-201ENST00000442607 1045 ntBASIC32.33■■■□□ 2.77
NINLQ9Y2I6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC32.33■■■□□ 2.77
NINLQ9Y2I6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
NINLQ9Y2I6 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC32.33■■■□□ 2.77
NINLQ9Y2I6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
NINLQ9Y2I6 MIR638-201ENST00000385237 100 ntBASIC32.32■■■□□ 2.77
NINLQ9Y2I6 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC32.32■■■□□ 2.77
NINLQ9Y2I6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
NINLQ9Y2I6 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC32.32■■■□□ 2.77
NINLQ9Y2I6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
NINLQ9Y2I6 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC32.32■■■□□ 2.76
NINLQ9Y2I6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
NINLQ9Y2I6 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC32.32■■■□□ 2.76
NINLQ9Y2I6 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC32.32■■■□□ 2.76
NINLQ9Y2I6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC32.32■■■□□ 2.76
NINLQ9Y2I6 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
NINLQ9Y2I6 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
NINLQ9Y2I6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC32.31■■■□□ 2.76
NINLQ9Y2I6 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC32.31■■■□□ 2.76
NINLQ9Y2I6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
NINLQ9Y2I6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
NINLQ9Y2I6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
NINLQ9Y2I6 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC32.3■■■□□ 2.76
NINLQ9Y2I6 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC32.29■■■□□ 2.76
NINLQ9Y2I6 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
NINLQ9Y2I6 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC32.29■■■□□ 2.76
NINLQ9Y2I6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC32.29■■■□□ 2.76
NINLQ9Y2I6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
NINLQ9Y2I6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
NINLQ9Y2I6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
NINLQ9Y2I6 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
NINLQ9Y2I6 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
NINLQ9Y2I6 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC32.28■■■□□ 2.76
NINLQ9Y2I6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC32.27■■■□□ 2.76
NINLQ9Y2I6 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC32.27■■■□□ 2.76
NINLQ9Y2I6 MTDHP2-201ENST00000601468 714 ntBASIC32.27■■■□□ 2.76
NINLQ9Y2I6 AC145676.1-201ENST00000514988 2004 ntBASIC32.27■■■□□ 2.76
NINLQ9Y2I6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
NINLQ9Y2I6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
NINLQ9Y2I6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
NINLQ9Y2I6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
NINLQ9Y2I6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC32.26■■■□□ 2.75
NINLQ9Y2I6 MIR6089-201ENST00000616698 64 ntBASIC32.26■■■□□ 2.75
NINLQ9Y2I6 AC091060.1-201ENST00000623524 1766 ntBASIC32.25■■■□□ 2.75
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms