Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
NPAP1Q9NZP6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NPAP1Q9NZP6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPAP1Q9NZP6 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.18■□□□□ 0.98
NPAP1Q9NZP6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.18■□□□□ 0.98
NPAP1Q9NZP6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NPAP1Q9NZP6 AC142472.1-201ENST00000612013 1741 ntBASIC21.18■□□□□ 0.98
NPAP1Q9NZP6 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
NPAP1Q9NZP6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.17■□□□□ 0.98
NPAP1Q9NZP6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPAP1Q9NZP6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPAP1Q9NZP6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NPAP1Q9NZP6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPAP1Q9NZP6 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NPAP1Q9NZP6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NPAP1Q9NZP6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NPAP1Q9NZP6 AP004609.3-201ENST00000610705 1884 ntBASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 MIR6765-201ENST00000614092 87 ntBASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NPAP1Q9NZP6 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPAP1Q9NZP6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NPAP1Q9NZP6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NPAP1Q9NZP6 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 AC018755.3-202ENST00000596210 929 ntBASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NPAP1Q9NZP6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAP1Q9NZP6 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAP1Q9NZP6 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NPAP1Q9NZP6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.11■□□□□ 0.97
NPAP1Q9NZP6 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NPAP1Q9NZP6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.11■□□□□ 0.97
NPAP1Q9NZP6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
NPAP1Q9NZP6 AC138932.3-201ENST00000567634 1902 ntBASIC21.1■□□□□ 0.97
NPAP1Q9NZP6 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.1■□□□□ 0.97
NPAP1Q9NZP6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
NPAP1Q9NZP6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NPAP1Q9NZP6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.1■□□□□ 0.97
NPAP1Q9NZP6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NPAP1Q9NZP6 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms