Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9N2K0 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Q9N2K0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9N2K0 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.62■□□□□ 0.73
Q9N2K0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9N2K0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9N2K0 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9N2K0 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q9N2K0 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.62■□□□□ 0.73
Q9N2K0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Q9N2K0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Q9N2K0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.62■□□□□ 0.73
Q9N2K0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9N2K0 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.61■□□□□ 0.73
Q9N2K0 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9N2K0 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Q9N2K0 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Q9N2K0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.61■□□□□ 0.73
Q9N2K0 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9N2K0 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Q9N2K0 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Q9N2K0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9N2K0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9N2K0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9N2K0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9N2K0 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC19.6■□□□□ 0.73
Q9N2K0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9N2K0 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.6■□□□□ 0.73
Q9N2K0 AC007029.1-201ENST00000604183 313 ntBASIC19.6■□□□□ 0.73
Q9N2K0 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.6■□□□□ 0.73
Q9N2K0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Q9N2K0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Q9N2K0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Q9N2K0 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Q9N2K0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Q9N2K0 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Q9N2K0 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Q9N2K0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q9N2K0 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Q9N2K0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.58■□□□□ 0.73
Q9N2K0 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q9N2K0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Q9N2K0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Q9N2K0 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9N2K0 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.58■□□□□ 0.72
Q9N2K0 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Q9N2K0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9N2K0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.58■□□□□ 0.72
Q9N2K0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Q9N2K0 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Q9N2K0 AC004812.2-201ENST00000611079 2094 ntBASIC19.57■□□□□ 0.72
Q9N2K0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9N2K0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9N2K0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9N2K0 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Q9N2K0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9N2K0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9N2K0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Q9N2K0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Q9N2K0 KRT18P10-201ENST00000388836 1287 ntBASIC19.56■□□□□ 0.72
Q9N2K0 RAP2CP1-202ENST00000605179 643 ntBASIC19.56■□□□□ 0.72
Q9N2K0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Q9N2K0 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.56■□□□□ 0.72
Q9N2K0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC19.55■□□□□ 0.72
Q9N2K0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC19.55■□□□□ 0.72
Q9N2K0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Q9N2K0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Q9N2K0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9N2K0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Q9N2K0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Q9N2K0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Q9N2K0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Q9N2K0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Q9N2K0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.54■□□□□ 0.72
Q9N2K0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Q9N2K0 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC19.54■□□□□ 0.72
Q9N2K0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Q9N2K0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Q9N2K0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Q9N2K0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Q9N2K0 HLA-L-211ENST00000482052 1765 ntBASIC19.53■□□□□ 0.72
Q9N2K0 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Q9N2K0 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.53■□□□□ 0.72
Q9N2K0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.53■□□□□ 0.72
Q9N2K0 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.53■□□□□ 0.72
Q9N2K0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.53■□□□□ 0.72
Q9N2K0 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Q9N2K0 FOXO3B-201ENST00000395675 1928 ntBASIC19.53■□□□□ 0.72
Q9N2K0 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.52■□□□□ 0.72
Q9N2K0 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Q9N2K0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q9N2K0 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC19.52■□□□□ 0.72
Q9N2K0 AC026202.3-201ENST00000600805 1127 ntBASIC19.52■□□□□ 0.72
Q9N2K0 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Q9N2K0 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q9N2K0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
Q9N2K0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Q9N2K0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.52■□□□□ 0.71
Q9N2K0 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.51■□□□□ 0.71
Q9N2K0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms