Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC38A1Q9H2H9 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A1Q9H2H9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC38A1Q9H2H9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 RPS2P7-201ENST00000447334 885 ntBASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 AC018755.3-202ENST00000596210 929 ntBASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC38A1Q9H2H9 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 U85056.1-201ENST00000616429 682 ntBASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC38A1Q9H2H9 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.71■■□□□ 1.07
SLC38A1Q9H2H9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC38A1Q9H2H9 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SLC38A1Q9H2H9 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SLC38A1Q9H2H9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
SLC38A1Q9H2H9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SLC38A1Q9H2H9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.71■■□□□ 1.07
SLC38A1Q9H2H9 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 DUX4L9-201ENST00000449051 1259 ntBASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 AC141586.4-201ENST00000624558 1573 ntBASIC21.7■■□□□ 1.06
SLC38A1Q9H2H9 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.69■■□□□ 1.06
SLC38A1Q9H2H9 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC38A1Q9H2H9 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.68■■□□□ 1.06
SLC38A1Q9H2H9 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SLC38A1Q9H2H9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SLC38A1Q9H2H9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SLC38A1Q9H2H9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SLC38A1Q9H2H9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 MIR6765-201ENST00000614092 87 ntBASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SLC38A1Q9H2H9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 AC087393.1-201ENST00000582896 145 ntBASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 HLA-L-211ENST00000482052 1765 ntBASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SLC38A1Q9H2H9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC38A1Q9H2H9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC38A1Q9H2H9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.65■■□□□ 1.06
SLC38A1Q9H2H9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SLC38A1Q9H2H9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC38A1Q9H2H9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SLC38A1Q9H2H9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.65■■□□□ 1.06
SLC38A1Q9H2H9 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.64■■□□□ 1.06
SLC38A1Q9H2H9 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 AC129492.7-201ENST00000622992 756 ntBASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
SLC38A1Q9H2H9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.63■■□□□ 1.05
SLC38A1Q9H2H9 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms