Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CDH23Q9H251 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC25.39■■□□□ 1.66
CDH23Q9H251 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.39■■□□□ 1.65
CDH23Q9H251 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.65
CDH23Q9H251 ID1-201ENST00000376105 1233 ntBASIC25.38■■□□□ 1.65
CDH23Q9H251 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.38■■□□□ 1.65
CDH23Q9H251 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDH23Q9H251 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CDH23Q9H251 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC25.38■■□□□ 1.65
CDH23Q9H251 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.38■■□□□ 1.65
CDH23Q9H251 RASA4CP-201ENST00000424092 1398 ntBASIC25.38■■□□□ 1.65
CDH23Q9H251 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CDH23Q9H251 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.38■■□□□ 1.65
CDH23Q9H251 AC022517.1-201ENST00000592429 346 ntBASIC25.38■■□□□ 1.65
CDH23Q9H251 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
CDH23Q9H251 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC25.37■■□□□ 1.65
CDH23Q9H251 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CDH23Q9H251 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.37■■□□□ 1.65
CDH23Q9H251 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.37■■□□□ 1.65
CDH23Q9H251 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC25.37■■□□□ 1.65
CDH23Q9H251 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
CDH23Q9H251 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDH23Q9H251 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.36■■□□□ 1.65
CDH23Q9H251 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
CDH23Q9H251 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.36■■□□□ 1.65
CDH23Q9H251 SNX5-217ENST00000606557 1087 ntBASIC25.36■■□□□ 1.65
CDH23Q9H251 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.35■■□□□ 1.65
CDH23Q9H251 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDH23Q9H251 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDH23Q9H251 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
CDH23Q9H251 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDH23Q9H251 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
CDH23Q9H251 KRT18P10-201ENST00000388836 1287 ntBASIC25.35■■□□□ 1.65
CDH23Q9H251 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.35■■□□□ 1.65
CDH23Q9H251 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.35■■□□□ 1.65
CDH23Q9H251 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC25.35■■□□□ 1.65
CDH23Q9H251 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.34■■□□□ 1.65
CDH23Q9H251 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC25.34■■□□□ 1.65
CDH23Q9H251 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.34■■□□□ 1.65
CDH23Q9H251 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC25.34■■□□□ 1.65
CDH23Q9H251 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
CDH23Q9H251 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC25.34■■□□□ 1.65
CDH23Q9H251 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDH23Q9H251 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25.33■■□□□ 1.65
CDH23Q9H251 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDH23Q9H251 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDH23Q9H251 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDH23Q9H251 SRD5A1P1-201ENST00000442297 786 ntBASIC25.33■■□□□ 1.65
CDH23Q9H251 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
CDH23Q9H251 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.33■■□□□ 1.65
CDH23Q9H251 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
CDH23Q9H251 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CDH23Q9H251 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC25.33■■□□□ 1.64
CDH23Q9H251 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.32■■□□□ 1.64
CDH23Q9H251 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDH23Q9H251 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
CDH23Q9H251 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
CDH23Q9H251 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.32■■□□□ 1.64
CDH23Q9H251 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
CDH23Q9H251 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.32■■□□□ 1.64
CDH23Q9H251 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDH23Q9H251 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
CDH23Q9H251 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC25.31■■□□□ 1.64
CDH23Q9H251 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC25.31■■□□□ 1.64
CDH23Q9H251 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC25.31■■□□□ 1.64
CDH23Q9H251 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDH23Q9H251 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDH23Q9H251 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
CDH23Q9H251 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.3■■□□□ 1.64
CDH23Q9H251 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.3■■□□□ 1.64
CDH23Q9H251 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDH23Q9H251 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDH23Q9H251 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.3■■□□□ 1.64
CDH23Q9H251 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.3■■□□□ 1.64
CDH23Q9H251 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
CDH23Q9H251 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
CDH23Q9H251 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CDH23Q9H251 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDH23Q9H251 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.29■■□□□ 1.64
CDH23Q9H251 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
CDH23Q9H251 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
CDH23Q9H251 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC25.28■■□□□ 1.64
CDH23Q9H251 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDH23Q9H251 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
CDH23Q9H251 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
CDH23Q9H251 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CDH23Q9H251 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CDH23Q9H251 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.27■■□□□ 1.64
CDH23Q9H251 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.27■■□□□ 1.64
CDH23Q9H251 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC25.27■■□□□ 1.64
CDH23Q9H251 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC25.27■■□□□ 1.64
CDH23Q9H251 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.27■■□□□ 1.64
CDH23Q9H251 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC25.26■■□□□ 1.64
CDH23Q9H251 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDH23Q9H251 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDH23Q9H251 LINC01003-201ENST00000564834 1764 ntBASIC25.26■■□□□ 1.63
CDH23Q9H251 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CDH23Q9H251 MIR4767-201ENST00000582827 78 ntBASIC25.25■■□□□ 1.63
CDH23Q9H251 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.25■■□□□ 1.63
CDH23Q9H251 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.25■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms