Protein–RNA interactions for Protein: Q9H0E3

SAP130, Histone deacetylase complex subunit SAP130, humanhuman

Predictions only

Length 1,048 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAP130Q9H0E3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.74■■□□□ 1.07
SAP130Q9H0E3 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SAP130Q9H0E3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SAP130Q9H0E3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SAP130Q9H0E3 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SAP130Q9H0E3 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.74■■□□□ 1.07
SAP130Q9H0E3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SAP130Q9H0E3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.73■■□□□ 1.07
SAP130Q9H0E3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SAP130Q9H0E3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.73■■□□□ 1.07
SAP130Q9H0E3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 DUX4L9-201ENST00000449051 1259 ntBASIC21.72■■□□□ 1.07
SAP130Q9H0E3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 AC087393.1-201ENST00000582896 145 ntBASIC21.72■■□□□ 1.07
SAP130Q9H0E3 MIR6765-201ENST00000614092 87 ntBASIC21.72■■□□□ 1.07
SAP130Q9H0E3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
SAP130Q9H0E3 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SAP130Q9H0E3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SAP130Q9H0E3 KRT18P60-201ENST00000312876 1297 ntBASIC21.7■■□□□ 1.06
SAP130Q9H0E3 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SAP130Q9H0E3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
SAP130Q9H0E3 AC129492.7-201ENST00000622992 756 ntBASIC21.7■■□□□ 1.06
SAP130Q9H0E3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SAP130Q9H0E3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.7■■□□□ 1.06
SAP130Q9H0E3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SAP130Q9H0E3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.68■■□□□ 1.06
SAP130Q9H0E3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 ABHD17AP5-201ENST00000580133 923 ntBASIC21.68■■□□□ 1.06
SAP130Q9H0E3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SAP130Q9H0E3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SAP130Q9H0E3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SAP130Q9H0E3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SAP130Q9H0E3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SAP130Q9H0E3 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SAP130Q9H0E3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 LINC01124-201ENST00000409786 2117 ntBASIC21.66■■□□□ 1.06
SAP130Q9H0E3 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 LINC00543-201ENST00000567234 1845 ntBASIC21.66■■□□□ 1.06
SAP130Q9H0E3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.66■■□□□ 1.06
SAP130Q9H0E3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SAP130Q9H0E3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
SAP130Q9H0E3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SAP130Q9H0E3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SAP130Q9H0E3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.64■■□□□ 1.05
SAP130Q9H0E3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SAP130Q9H0E3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SAP130Q9H0E3 AC141586.4-201ENST00000624558 1573 ntBASIC21.64■■□□□ 1.05
SAP130Q9H0E3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
SAP130Q9H0E3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
SAP130Q9H0E3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
SAP130Q9H0E3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SAP130Q9H0E3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.63■■□□□ 1.05
SAP130Q9H0E3 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SAP130Q9H0E3 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms