Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
RTFDC1Q9BY42 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
RTFDC1Q9BY42 CLTA-206ENST00000466396 695 ntTSL 2 BASIC28.94■■■□□ 2.22
RTFDC1Q9BY42 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
RTFDC1Q9BY42 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 MIR6722-201ENST00000617286 78 ntBASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
RTFDC1Q9BY42 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 SNX5-217ENST00000606557 1087 ntBASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC28.91■■■□□ 2.22
RTFDC1Q9BY42 FOXO3B-201ENST00000395675 1928 ntBASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
RTFDC1Q9BY42 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.22
RTFDC1Q9BY42 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
RTFDC1Q9BY42 ZNRF2P3-201ENST00000424200 374 ntBASIC28.89■■■□□ 2.22
RTFDC1Q9BY42 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.89■■■□□ 2.21
RTFDC1Q9BY42 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTFDC1Q9BY42 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 PBX2P1-201ENST00000493219 1291 ntBASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 AL031432.3-201ENST00000607698 485 ntBASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTFDC1Q9BY42 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTFDC1Q9BY42 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.85■■■□□ 2.21
RTFDC1Q9BY42 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.84■■■□□ 2.21
RTFDC1Q9BY42 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.84■■■□□ 2.21
RTFDC1Q9BY42 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RTFDC1Q9BY42 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 SUDS3P1-201ENST00000505831 966 ntBASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTFDC1Q9BY42 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 RARRES2P6-201ENST00000567333 442 ntBASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC28.82■■■□□ 2.2
RTFDC1Q9BY42 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 UNC93B3-201ENST00000308076 687 ntBASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 AC142381.2-201ENST00000566120 298 ntBASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTFDC1Q9BY42 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTFDC1Q9BY42 AC090877.2-201ENST00000558441 1738 ntBASIC28.8■■■□□ 2.2
RTFDC1Q9BY42 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 AC026271.2-201ENST00000428091 497 ntBASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTFDC1Q9BY42 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
RTFDC1Q9BY42 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
RTFDC1Q9BY42 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Retrieved 100 of 98,524 protein–RNA pairs in 156.6 ms