Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
FOXN4Q96NZ1 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 AL592293.1-201ENST00000502889 1188 ntBASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.92■□□□□ 0.94
FOXN4Q96NZ1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 AP003733.4-201ENST00000623785 1697 ntBASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
FOXN4Q96NZ1 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
FOXN4Q96NZ1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.89■□□□□ 0.94
FOXN4Q96NZ1 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
FOXN4Q96NZ1 SPCS2P3-201ENST00000500401 656 ntBASIC20.89■□□□□ 0.93
FOXN4Q96NZ1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.89■□□□□ 0.93
FOXN4Q96NZ1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN4Q96NZ1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC20.89■□□□□ 0.93
FOXN4Q96NZ1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN4Q96NZ1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN4Q96NZ1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
FOXN4Q96NZ1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.88■□□□□ 0.93
FOXN4Q96NZ1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 AC129492.7-201ENST00000622992 756 ntBASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
FOXN4Q96NZ1 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 DUX4L18-201ENST00000553347 1267 ntBASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
FOXN4Q96NZ1 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN4Q96NZ1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.85■□□□□ 0.93
FOXN4Q96NZ1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN4Q96NZ1 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
FOXN4Q96NZ1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.85■□□□□ 0.93
FOXN4Q96NZ1 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.85■□□□□ 0.93
FOXN4Q96NZ1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
FOXN4Q96NZ1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
FOXN4Q96NZ1 FOXO3B-201ENST00000395675 1928 ntBASIC20.84■□□□□ 0.93
FOXN4Q96NZ1 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.83■□□□□ 0.93
FOXN4Q96NZ1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXN4Q96NZ1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXN4Q96NZ1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.83■□□□□ 0.93
FOXN4Q96NZ1 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
FOXN4Q96NZ1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXN4Q96NZ1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXN4Q96NZ1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
FOXN4Q96NZ1 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
FOXN4Q96NZ1 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms