Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
LRCH3Q96II8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC25.69■■□□□ 1.7
LRCH3Q96II8 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC25.69■■□□□ 1.7
LRCH3Q96II8 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC25.69■■□□□ 1.7
LRCH3Q96II8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRCH3Q96II8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRCH3Q96II8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
LRCH3Q96II8 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.68■■□□□ 1.7
LRCH3Q96II8 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LRCH3Q96II8 AP002414.2-202ENST00000590929 1450 ntBASIC25.67■■□□□ 1.7
LRCH3Q96II8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LRCH3Q96II8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC25.67■■□□□ 1.7
LRCH3Q96II8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.67■■□□□ 1.7
LRCH3Q96II8 AC034268.1-201ENST00000441047 882 ntBASIC25.67■■□□□ 1.7
LRCH3Q96II8 MIR4767-201ENST00000582827 78 ntBASIC25.67■■□□□ 1.7
LRCH3Q96II8 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.67■■□□□ 1.7
LRCH3Q96II8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRCH3Q96II8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
LRCH3Q96II8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
LRCH3Q96II8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
LRCH3Q96II8 HLA-L-209ENST00000420110 1011 ntBASIC25.66■■□□□ 1.7
LRCH3Q96II8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
LRCH3Q96II8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.66■■□□□ 1.7
LRCH3Q96II8 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
LRCH3Q96II8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
LRCH3Q96II8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LRCH3Q96II8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
LRCH3Q96II8 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
LRCH3Q96II8 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
LRCH3Q96II8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
LRCH3Q96II8 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
LRCH3Q96II8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
LRCH3Q96II8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
LRCH3Q96II8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
LRCH3Q96II8 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
LRCH3Q96II8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRCH3Q96II8 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRCH3Q96II8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
LRCH3Q96II8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC25.63■■□□□ 1.69
LRCH3Q96II8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC25.63■■□□□ 1.69
LRCH3Q96II8 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC25.63■■□□□ 1.69
LRCH3Q96II8 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC25.63■■□□□ 1.69
LRCH3Q96II8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
LRCH3Q96II8 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
LRCH3Q96II8 AC011551.1-201ENST00000614101 683 ntBASIC25.62■■□□□ 1.69
LRCH3Q96II8 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.62■■□□□ 1.69
LRCH3Q96II8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.62■■□□□ 1.69
LRCH3Q96II8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC25.62■■□□□ 1.69
LRCH3Q96II8 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.61■■□□□ 1.69
LRCH3Q96II8 AF131216.4-201ENST00000638924 1588 ntBASIC25.61■■□□□ 1.69
LRCH3Q96II8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
LRCH3Q96II8 ABHD17AP1-201ENST00000358206 933 ntBASIC25.6■■□□□ 1.69
LRCH3Q96II8 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
LRCH3Q96II8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LRCH3Q96II8 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
LRCH3Q96II8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.6■■□□□ 1.69
LRCH3Q96II8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRCH3Q96II8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRCH3Q96II8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRCH3Q96II8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.6■■□□□ 1.69
LRCH3Q96II8 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC25.59■■□□□ 1.69
LRCH3Q96II8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.59■■□□□ 1.69
LRCH3Q96II8 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.59■■□□□ 1.69
LRCH3Q96II8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRCH3Q96II8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRCH3Q96II8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
LRCH3Q96II8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
LRCH3Q96II8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LRCH3Q96II8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC25.58■■□□□ 1.69
LRCH3Q96II8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.58■■□□□ 1.69
LRCH3Q96II8 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
LRCH3Q96II8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.57■■□□□ 1.68
LRCH3Q96II8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRCH3Q96II8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRCH3Q96II8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.57■■□□□ 1.68
LRCH3Q96II8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC25.57■■□□□ 1.68
LRCH3Q96II8 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC25.57■■□□□ 1.68
LRCH3Q96II8 DUX4L19-201ENST00000557448 1267 ntBASIC25.57■■□□□ 1.68
LRCH3Q96II8 AC027682.1-201ENST00000562846 899 ntBASIC25.57■■□□□ 1.68
LRCH3Q96II8 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
LRCH3Q96II8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
LRCH3Q96II8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC25.56■■□□□ 1.68
LRCH3Q96II8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.56■■□□□ 1.68
LRCH3Q96II8 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.56■■□□□ 1.68
LRCH3Q96II8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.56■■□□□ 1.68
LRCH3Q96II8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
LRCH3Q96II8 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LRCH3Q96II8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC25.55■■□□□ 1.68
LRCH3Q96II8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LRCH3Q96II8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
LRCH3Q96II8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LRCH3Q96II8 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.55■■□□□ 1.68
LRCH3Q96II8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms