Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.77■□□□□ 0.92
APH1AQ96BI3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
APH1AQ96BI3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC20.77■□□□□ 0.91
APH1AQ96BI3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.76■□□□□ 0.91
APH1AQ96BI3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC20.76■□□□□ 0.91
APH1AQ96BI3 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1AQ96BI3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1AQ96BI3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
APH1AQ96BI3 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1AQ96BI3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.76■□□□□ 0.91
APH1AQ96BI3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
APH1AQ96BI3 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APH1AQ96BI3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
APH1AQ96BI3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.76■□□□□ 0.91
APH1AQ96BI3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
APH1AQ96BI3 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.76■□□□□ 0.91
APH1AQ96BI3 AC090877.2-201ENST00000558441 1738 ntBASIC20.75■□□□□ 0.91
APH1AQ96BI3 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
APH1AQ96BI3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.75■□□□□ 0.91
APH1AQ96BI3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.75■□□□□ 0.91
APH1AQ96BI3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
APH1AQ96BI3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
APH1AQ96BI3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.75■□□□□ 0.91
APH1AQ96BI3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APH1AQ96BI3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APH1AQ96BI3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
APH1AQ96BI3 AC009299.2-201ENST00000482477 511 ntBASIC20.74■□□□□ 0.91
APH1AQ96BI3 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
APH1AQ96BI3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.74■□□□□ 0.91
APH1AQ96BI3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.74■□□□□ 0.91
APH1AQ96BI3 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.74■□□□□ 0.91
APH1AQ96BI3 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
APH1AQ96BI3 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
APH1AQ96BI3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
APH1AQ96BI3 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
APH1AQ96BI3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1AQ96BI3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
APH1AQ96BI3 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.72■□□□□ 0.91
APH1AQ96BI3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
APH1AQ96BI3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1AQ96BI3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
APH1AQ96BI3 AL035685.1-201ENST00000636663 812 ntBASIC20.72■□□□□ 0.91
APH1AQ96BI3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.72■□□□□ 0.91
APH1AQ96BI3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APH1AQ96BI3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
APH1AQ96BI3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.71■□□□□ 0.91
APH1AQ96BI3 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.71■□□□□ 0.91
APH1AQ96BI3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.71■□□□□ 0.91
APH1AQ96BI3 MIR4281-201ENST00000580852 62 ntBASIC20.71■□□□□ 0.91
APH1AQ96BI3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.71■□□□□ 0.91
APH1AQ96BI3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APH1AQ96BI3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
APH1AQ96BI3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1AQ96BI3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APH1AQ96BI3 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1AQ96BI3 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.7■□□□□ 0.9
APH1AQ96BI3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
APH1AQ96BI3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
APH1AQ96BI3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
APH1AQ96BI3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
APH1AQ96BI3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1AQ96BI3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
APH1AQ96BI3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1AQ96BI3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
APH1AQ96BI3 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1AQ96BI3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1AQ96BI3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1AQ96BI3 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
APH1AQ96BI3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.69■□□□□ 0.9
APH1AQ96BI3 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
APH1AQ96BI3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
APH1AQ96BI3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
APH1AQ96BI3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APH1AQ96BI3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APH1AQ96BI3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APH1AQ96BI3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
APH1AQ96BI3 BX664725.1-201ENST00000438252 379 ntBASIC20.68■□□□□ 0.9
APH1AQ96BI3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
APH1AQ96BI3 MIR6089-201ENST00000616698 64 ntBASIC20.68■□□□□ 0.9
APH1AQ96BI3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
APH1AQ96BI3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
APH1AQ96BI3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
APH1AQ96BI3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
APH1AQ96BI3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms