Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
CLDN23Q96B33 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN23Q96B33 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN23Q96B33 AL136967.2-201ENST00000623968 743 ntBASIC23.84■■□□□ 1.41
CLDN23Q96B33 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN23Q96B33 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CLDN23Q96B33 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.83■■□□□ 1.41
CLDN23Q96B33 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
CLDN23Q96B33 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN23Q96B33 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN23Q96B33 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN23Q96B33 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN23Q96B33 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CLDN23Q96B33 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.83■■□□□ 1.41
CLDN23Q96B33 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.83■■□□□ 1.41
CLDN23Q96B33 AC105265.2-201ENST00000467189 838 ntBASIC23.82■■□□□ 1.4
CLDN23Q96B33 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN23Q96B33 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN23Q96B33 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CLDN23Q96B33 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CLDN23Q96B33 FOXO3B-201ENST00000395675 1928 ntBASIC23.81■■□□□ 1.4
CLDN23Q96B33 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
CLDN23Q96B33 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.81■■□□□ 1.4
CLDN23Q96B33 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN23Q96B33 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.81■■□□□ 1.4
CLDN23Q96B33 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLDN23Q96B33 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN23Q96B33 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLDN23Q96B33 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC23.8■■□□□ 1.4
CLDN23Q96B33 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CLDN23Q96B33 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN23Q96B33 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN23Q96B33 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN23Q96B33 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLDN23Q96B33 MIR6821-201ENST00000617625 74 ntBASIC23.79■■□□□ 1.4
CLDN23Q96B33 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.79■■□□□ 1.4
CLDN23Q96B33 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.78■■□□□ 1.4
CLDN23Q96B33 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN23Q96B33 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC23.78■■□□□ 1.4
CLDN23Q96B33 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN23Q96B33 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN23Q96B33 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLDN23Q96B33 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.78■■□□□ 1.4
CLDN23Q96B33 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CLDN23Q96B33 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN23Q96B33 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN23Q96B33 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN23Q96B33 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CLDN23Q96B33 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN23Q96B33 MIR939-201ENST00000401314 82 ntBASIC23.77■■□□□ 1.4
CLDN23Q96B33 AF213884.3-201ENST00000563833 479 ntBASIC23.77■■□□□ 1.4
CLDN23Q96B33 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CLDN23Q96B33 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.77■■□□□ 1.4
CLDN23Q96B33 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLDN23Q96B33 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.77■■□□□ 1.4
CLDN23Q96B33 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
CLDN23Q96B33 AC090877.2-201ENST00000558441 1738 ntBASIC23.76■■□□□ 1.39
CLDN23Q96B33 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN23Q96B33 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLDN23Q96B33 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.76■■□□□ 1.39
CLDN23Q96B33 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.76■■□□□ 1.39
CLDN23Q96B33 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC23.76■■□□□ 1.39
CLDN23Q96B33 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.76■■□□□ 1.39
CLDN23Q96B33 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CLDN23Q96B33 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN23Q96B33 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.75■■□□□ 1.39
CLDN23Q96B33 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.75■■□□□ 1.39
CLDN23Q96B33 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLDN23Q96B33 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.75■■□□□ 1.39
CLDN23Q96B33 DUX4L19-201ENST00000557448 1267 ntBASIC23.75■■□□□ 1.39
CLDN23Q96B33 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.75■■□□□ 1.39
CLDN23Q96B33 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
CLDN23Q96B33 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.74■■□□□ 1.39
CLDN23Q96B33 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN23Q96B33 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC23.74■■□□□ 1.39
CLDN23Q96B33 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CLDN23Q96B33 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.74■■□□□ 1.39
CLDN23Q96B33 AC097381.1-201ENST00000429019 1296 ntBASIC23.74■■□□□ 1.39
CLDN23Q96B33 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.74■■□□□ 1.39
CLDN23Q96B33 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.74■■□□□ 1.39
CLDN23Q96B33 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN23Q96B33 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN23Q96B33 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLDN23Q96B33 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.74■■□□□ 1.39
CLDN23Q96B33 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN23Q96B33 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN23Q96B33 AP001330.3-201ENST00000520123 633 ntBASIC23.73■■□□□ 1.39
CLDN23Q96B33 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC23.73■■□□□ 1.39
CLDN23Q96B33 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLDN23Q96B33 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLDN23Q96B33 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.72■■□□□ 1.39
CLDN23Q96B33 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CLDN23Q96B33 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.72■■□□□ 1.39
CLDN23Q96B33 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
CLDN23Q96B33 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN23Q96B33 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN23Q96B33 AC091305.1-201ENST00000479476 895 ntBASIC23.71■■□□□ 1.39
CLDN23Q96B33 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.71■■□□□ 1.39
CLDN23Q96B33 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLDN23Q96B33 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms