Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
SNED1Q8TER0 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC29.06■■■□□ 2.24
SNED1Q8TER0 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SNED1Q8TER0 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC29.06■■■□□ 2.24
SNED1Q8TER0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC29.06■■■□□ 2.24
SNED1Q8TER0 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SNED1Q8TER0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC29.05■■■□□ 2.24
SNED1Q8TER0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
SNED1Q8TER0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC29.05■■■□□ 2.24
SNED1Q8TER0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC29.05■■■□□ 2.24
SNED1Q8TER0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
SNED1Q8TER0 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
SNED1Q8TER0 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
SNED1Q8TER0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC29.04■■■□□ 2.24
SNED1Q8TER0 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC29.04■■■□□ 2.24
SNED1Q8TER0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC29.04■■■□□ 2.24
SNED1Q8TER0 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC29.04■■■□□ 2.24
SNED1Q8TER0 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
SNED1Q8TER0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC29.04■■■□□ 2.24
SNED1Q8TER0 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC29.04■■■□□ 2.24
SNED1Q8TER0 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
SNED1Q8TER0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC29.03■■■□□ 2.24
SNED1Q8TER0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
SNED1Q8TER0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
SNED1Q8TER0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SNED1Q8TER0 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC29.02■■■□□ 2.24
SNED1Q8TER0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
SNED1Q8TER0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC29.02■■■□□ 2.24
SNED1Q8TER0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC29.01■■■□□ 2.23
SNED1Q8TER0 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.01■■■□□ 2.23
SNED1Q8TER0 AC135279.3-201ENST00000610945 1311 ntBASIC29.01■■■□□ 2.23
SNED1Q8TER0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC29■■■□□ 2.23
SNED1Q8TER0 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC29■■■□□ 2.23
SNED1Q8TER0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC29■■■□□ 2.23
SNED1Q8TER0 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
SNED1Q8TER0 PBX2P1-201ENST00000493219 1291 ntBASIC28.99■■■□□ 2.23
SNED1Q8TER0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.99■■■□□ 2.23
SNED1Q8TER0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC28.99■■■□□ 2.23
SNED1Q8TER0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC28.99■■■□□ 2.23
SNED1Q8TER0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
SNED1Q8TER0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNED1Q8TER0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.98■■■□□ 2.23
SNED1Q8TER0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.98■■■□□ 2.23
SNED1Q8TER0 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
SNED1Q8TER0 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
SNED1Q8TER0 AC142381.2-201ENST00000566120 298 ntBASIC28.97■■■□□ 2.23
SNED1Q8TER0 MIR6722-201ENST00000617286 78 ntBASIC28.97■■■□□ 2.23
SNED1Q8TER0 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SNED1Q8TER0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNED1Q8TER0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
SNED1Q8TER0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC28.96■■■□□ 2.23
SNED1Q8TER0 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC28.96■■■□□ 2.23
SNED1Q8TER0 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
SNED1Q8TER0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SNED1Q8TER0 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
SNED1Q8TER0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.95■■■□□ 2.22
SNED1Q8TER0 UNC93B3-201ENST00000308076 687 ntBASIC28.94■■■□□ 2.22
SNED1Q8TER0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC28.94■■■□□ 2.22
SNED1Q8TER0 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC28.94■■■□□ 2.22
SNED1Q8TER0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC28.94■■■□□ 2.22
SNED1Q8TER0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
SNED1Q8TER0 AC092666.2-201ENST00000613287 246 ntBASIC28.94■■■□□ 2.22
SNED1Q8TER0 FOXO3B-201ENST00000395675 1928 ntBASIC28.93■■■□□ 2.22
SNED1Q8TER0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC28.93■■■□□ 2.22
SNED1Q8TER0 AL136162.1-201ENST00000607711 1078 ntBASIC28.93■■■□□ 2.22
SNED1Q8TER0 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC28.93■■■□□ 2.22
SNED1Q8TER0 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNED1Q8TER0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNED1Q8TER0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNED1Q8TER0 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC28.92■■■□□ 2.22
SNED1Q8TER0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC28.92■■■□□ 2.22
SNED1Q8TER0 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.92■■■□□ 2.22
SNED1Q8TER0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC28.92■■■□□ 2.22
SNED1Q8TER0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
SNED1Q8TER0 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
SNED1Q8TER0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
SNED1Q8TER0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SNED1Q8TER0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SNED1Q8TER0 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.9■■■□□ 2.22
SNED1Q8TER0 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
SNED1Q8TER0 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC28.9■■■□□ 2.22
SNED1Q8TER0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.89■■■□□ 2.22
SNED1Q8TER0 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.89■■■□□ 2.22
SNED1Q8TER0 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.89■■■□□ 2.21
SNED1Q8TER0 EDA-201ENST00000338901 1233 ntBASIC28.88■■■□□ 2.21
SNED1Q8TER0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.88■■■□□ 2.21
SNED1Q8TER0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.88■■■□□ 2.21
SNED1Q8TER0 AC024257.2-201ENST00000549699 147 ntBASIC28.88■■■□□ 2.21
SNED1Q8TER0 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC28.88■■■□□ 2.21
SNED1Q8TER0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.88■■■□□ 2.21
SNED1Q8TER0 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC28.88■■■□□ 2.21
SNED1Q8TER0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.87■■■□□ 2.21
SNED1Q8TER0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SNED1Q8TER0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC28.87■■■□□ 2.21
SNED1Q8TER0 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.86■■■□□ 2.21
SNED1Q8TER0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SNED1Q8TER0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
SNED1Q8TER0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
SNED1Q8TER0 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.86■■■□□ 2.21
SNED1Q8TER0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.86■■■□□ 2.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms