Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SHKBP1Q8TBC3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SHKBP1Q8TBC3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SHKBP1Q8TBC3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC24.72■■□□□ 1.55
SHKBP1Q8TBC3 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.71■■□□□ 1.55
SHKBP1Q8TBC3 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.71■■□□□ 1.55
SHKBP1Q8TBC3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.71■■□□□ 1.55
SHKBP1Q8TBC3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SHKBP1Q8TBC3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.71■■□□□ 1.55
SHKBP1Q8TBC3 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC24.7■■□□□ 1.55
SHKBP1Q8TBC3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.7■■□□□ 1.55
SHKBP1Q8TBC3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.7■■□□□ 1.55
SHKBP1Q8TBC3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHKBP1Q8TBC3 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHKBP1Q8TBC3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.7■■□□□ 1.54
SHKBP1Q8TBC3 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.7■■□□□ 1.54
SHKBP1Q8TBC3 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHKBP1Q8TBC3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SHKBP1Q8TBC3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SHKBP1Q8TBC3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.69■■□□□ 1.54
SHKBP1Q8TBC3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.69■■□□□ 1.54
SHKBP1Q8TBC3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
SHKBP1Q8TBC3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHKBP1Q8TBC3 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHKBP1Q8TBC3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SHKBP1Q8TBC3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHKBP1Q8TBC3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SHKBP1Q8TBC3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SHKBP1Q8TBC3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SHKBP1Q8TBC3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.68■■□□□ 1.54
SHKBP1Q8TBC3 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.68■■□□□ 1.54
SHKBP1Q8TBC3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SHKBP1Q8TBC3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.67■■□□□ 1.54
SHKBP1Q8TBC3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC24.67■■□□□ 1.54
SHKBP1Q8TBC3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 AC010997.5-201ENST00000609182 354 ntBASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 FOXO3B-201ENST00000395675 1928 ntBASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
SHKBP1Q8TBC3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHKBP1Q8TBC3 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SHKBP1Q8TBC3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.65■■□□□ 1.54
SHKBP1Q8TBC3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC24.65■■□□□ 1.54
SHKBP1Q8TBC3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC24.65■■□□□ 1.54
SHKBP1Q8TBC3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.64■■□□□ 1.54
SHKBP1Q8TBC3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SHKBP1Q8TBC3 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC24.64■■□□□ 1.54
SHKBP1Q8TBC3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.64■■□□□ 1.54
SHKBP1Q8TBC3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SHKBP1Q8TBC3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC24.64■■□□□ 1.54
SHKBP1Q8TBC3 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC24.64■■□□□ 1.54
SHKBP1Q8TBC3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
SHKBP1Q8TBC3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC24.63■■□□□ 1.53
SHKBP1Q8TBC3 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.63■■□□□ 1.53
SHKBP1Q8TBC3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SHKBP1Q8TBC3 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC24.63■■□□□ 1.53
SHKBP1Q8TBC3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC24.63■■□□□ 1.53
SHKBP1Q8TBC3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
SHKBP1Q8TBC3 AF131216.4-201ENST00000638924 1588 ntBASIC24.63■■□□□ 1.53
SHKBP1Q8TBC3 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 AC131281.2-201ENST00000520478 145 ntBASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 MTDHP2-201ENST00000601468 714 ntBASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC24.62■■□□□ 1.53
SHKBP1Q8TBC3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 RPP21-222ENST00000433076 577 ntTSL 2 BASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 AL117332.1-201ENST00000622628 974 ntBASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SHKBP1Q8TBC3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SHKBP1Q8TBC3 ERN1-208ENST00000606895 2068 ntBASIC24.6■■□□□ 1.53
SHKBP1Q8TBC3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.6■■□□□ 1.53
SHKBP1Q8TBC3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC24.6■■□□□ 1.53
SHKBP1Q8TBC3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SHKBP1Q8TBC3 AC096887.2-201ENST00000623443 1957 ntBASIC24.6■■□□□ 1.53
SHKBP1Q8TBC3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC24.6■■□□□ 1.53
SHKBP1Q8TBC3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms