Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLDND2Q8NHS1 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CLDND2Q8NHS1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.86■□□□□ 0.77
CLDND2Q8NHS1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDND2Q8NHS1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLDND2Q8NHS1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC19.86■□□□□ 0.77
CLDND2Q8NHS1 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLDND2Q8NHS1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLDND2Q8NHS1 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 BX664725.1-201ENST00000438252 379 ntBASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 AL356441.2-201ENST00000443009 864 ntBASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 KRT125P-201ENST00000546827 989 ntBASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLDND2Q8NHS1 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 AC120024.1-201ENST00000562672 995 ntBASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLDND2Q8NHS1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDND2Q8NHS1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDND2Q8NHS1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDND2Q8NHS1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDND2Q8NHS1 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
CLDND2Q8NHS1 AL592295.1-201ENST00000400984 884 ntBASIC19.83■□□□□ 0.77
CLDND2Q8NHS1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.83■□□□□ 0.77
CLDND2Q8NHS1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDND2Q8NHS1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.83■□□□□ 0.76
CLDND2Q8NHS1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDND2Q8NHS1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDND2Q8NHS1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CLDND2Q8NHS1 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDND2Q8NHS1 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDND2Q8NHS1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDND2Q8NHS1 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CLDND2Q8NHS1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDND2Q8NHS1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 MIR4787-201ENST00000607364 84 ntBASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDND2Q8NHS1 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDND2Q8NHS1 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDND2Q8NHS1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDND2Q8NHS1 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDND2Q8NHS1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDND2Q8NHS1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDND2Q8NHS1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 DUSP8P4-201ENST00000399538 1761 ntBASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDND2Q8NHS1 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLDND2Q8NHS1 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDND2Q8NHS1 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDND2Q8NHS1 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDND2Q8NHS1 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDND2Q8NHS1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDND2Q8NHS1 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms