Protein–RNA interactions for Protein: Q8NEP9

ZNF555, Zinc finger protein 555, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF555Q8NEP9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF555Q8NEP9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ZNF555Q8NEP9 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF555Q8NEP9 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.66■■□□□ 1.06
ZNF555Q8NEP9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
ZNF555Q8NEP9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
ZNF555Q8NEP9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
ZNF555Q8NEP9 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF555Q8NEP9 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ZNF555Q8NEP9 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
ZNF555Q8NEP9 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ZNF555Q8NEP9 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF555Q8NEP9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
ZNF555Q8NEP9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF555Q8NEP9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF555Q8NEP9 C9orf163-202ENST00000624034 2573 ntBASIC21.64■■□□□ 1.05
ZNF555Q8NEP9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ZNF555Q8NEP9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.64■■□□□ 1.05
ZNF555Q8NEP9 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF555Q8NEP9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
ZNF555Q8NEP9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF555Q8NEP9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC21.63■■□□□ 1.05
ZNF555Q8NEP9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF555Q8NEP9 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ZNF555Q8NEP9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF555Q8NEP9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF555Q8NEP9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF555Q8NEP9 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
ZNF555Q8NEP9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
ZNF555Q8NEP9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.62■■□□□ 1.05
ZNF555Q8NEP9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
ZNF555Q8NEP9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 AL117328.2-201ENST00000624617 1940 ntBASIC21.61■■□□□ 1.05
ZNF555Q8NEP9 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 AL359258.2-201ENST00000564063 1566 ntBASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF555Q8NEP9 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF555Q8NEP9 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF555Q8NEP9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.58■■□□□ 1.05
ZNF555Q8NEP9 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF555Q8NEP9 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF555Q8NEP9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF555Q8NEP9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.58■■□□□ 1.05
ZNF555Q8NEP9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF555Q8NEP9 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ZNF555Q8NEP9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF555Q8NEP9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF555Q8NEP9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ZNF555Q8NEP9 MIR219A2-201ENST00000608502 1504 ntBASIC21.56■■□□□ 1.04
ZNF555Q8NEP9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ZNF555Q8NEP9 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.55■■□□□ 1.04
ZNF555Q8NEP9 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ZNF555Q8NEP9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF555Q8NEP9 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms