Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
PHC3Q8NDX5 AC012676.1-201ENST00000574705 1949 ntBASIC23.33■■□□□ 1.33
PHC3Q8NDX5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 RPS2P7-201ENST00000447334 885 ntBASIC23.33■■□□□ 1.33
PHC3Q8NDX5 AC139795.1-202ENST00000500444 432 ntBASIC23.33■■□□□ 1.33
PHC3Q8NDX5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
PHC3Q8NDX5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PHC3Q8NDX5 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
PHC3Q8NDX5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
PHC3Q8NDX5 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PHC3Q8NDX5 DUSP8P4-201ENST00000399538 1761 ntBASIC23.32■■□□□ 1.32
PHC3Q8NDX5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PHC3Q8NDX5 HYI-210ENST00000486909 905 ntTSL 5 BASIC23.31■■□□□ 1.32
PHC3Q8NDX5 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC23.31■■□□□ 1.32
PHC3Q8NDX5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PHC3Q8NDX5 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PHC3Q8NDX5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.3■■□□□ 1.32
PHC3Q8NDX5 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PHC3Q8NDX5 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC23.3■■□□□ 1.32
PHC3Q8NDX5 AC087393.1-201ENST00000582896 145 ntBASIC23.3■■□□□ 1.32
PHC3Q8NDX5 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 AC010980.1-201ENST00000587192 1142 ntBASIC23.29■■□□□ 1.32
PHC3Q8NDX5 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PHC3Q8NDX5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PHC3Q8NDX5 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PHC3Q8NDX5 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PHC3Q8NDX5 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PHC3Q8NDX5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PHC3Q8NDX5 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PHC3Q8NDX5 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC23.26■■□□□ 1.31
PHC3Q8NDX5 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PHC3Q8NDX5 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PHC3Q8NDX5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
PHC3Q8NDX5 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PHC3Q8NDX5 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PHC3Q8NDX5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 LINC00543-201ENST00000567234 1845 ntBASIC23.25■■□□□ 1.31
PHC3Q8NDX5 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 PVT1_1.1-201ENST00000615125 194 ntBASIC23.25■■□□□ 1.31
PHC3Q8NDX5 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PHC3Q8NDX5 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PHC3Q8NDX5 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 BEX3-202ENST00000372634 753 ntTSL 2 BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
PHC3Q8NDX5 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 162.3 ms