Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
LSMEM1Q8N8F7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
LSMEM1Q8N8F7 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSMEM1Q8N8F7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSMEM1Q8N8F7 AC018755.3-202ENST00000596210 929 ntBASIC21.46■■□□□ 1.03
LSMEM1Q8N8F7 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSMEM1Q8N8F7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
LSMEM1Q8N8F7 LINC01124-201ENST00000409786 2117 ntBASIC21.45■■□□□ 1.02
LSMEM1Q8N8F7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.45■■□□□ 1.02
LSMEM1Q8N8F7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
LSMEM1Q8N8F7 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 RPS2P7-201ENST00000447334 885 ntBASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 SPCS2P3-201ENST00000500401 656 ntBASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
LSMEM1Q8N8F7 LINC00543-201ENST00000567234 1845 ntBASIC21.43■■□□□ 1.02
LSMEM1Q8N8F7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.43■■□□□ 1.02
LSMEM1Q8N8F7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
LSMEM1Q8N8F7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
LSMEM1Q8N8F7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 AC141586.4-201ENST00000624558 1573 ntBASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
LSMEM1Q8N8F7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 AC087393.1-201ENST00000582896 145 ntBASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 MIR6765-201ENST00000614092 87 ntBASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 U85056.1-201ENST00000616429 682 ntBASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
LSMEM1Q8N8F7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
LSMEM1Q8N8F7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
LSMEM1Q8N8F7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.39■■□□□ 1.01
LSMEM1Q8N8F7 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LSMEM1Q8N8F7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LSMEM1Q8N8F7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
LSMEM1Q8N8F7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
LSMEM1Q8N8F7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 DUX4L9-201ENST00000449051 1259 ntBASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LSMEM1Q8N8F7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
LSMEM1Q8N8F7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LSMEM1Q8N8F7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.37■■□□□ 1.01
LSMEM1Q8N8F7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LSMEM1Q8N8F7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
LSMEM1Q8N8F7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.36■■□□□ 1.01
LSMEM1Q8N8F7 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LSMEM1Q8N8F7 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms