Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRRTM3Q86VH5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
LRRTM3Q86VH5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.93■■□□□ 1.58
LRRTM3Q86VH5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LRRTM3Q86VH5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRTM3Q86VH5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
LRRTM3Q86VH5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRTM3Q86VH5 UNC93B8-201ENST00000511903 705 ntBASIC24.92■■□□□ 1.58
LRRTM3Q86VH5 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRTM3Q86VH5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
LRRTM3Q86VH5 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC24.91■■□□□ 1.58
LRRTM3Q86VH5 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
LRRTM3Q86VH5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.91■■□□□ 1.58
LRRTM3Q86VH5 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.91■■□□□ 1.58
LRRTM3Q86VH5 AC090877.2-201ENST00000558441 1738 ntBASIC24.91■■□□□ 1.58
LRRTM3Q86VH5 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 AF131216.4-201ENST00000638924 1588 ntBASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
LRRTM3Q86VH5 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.89■■□□□ 1.58
LRRTM3Q86VH5 SLC6A10P-202ENST00000431994 2058 ntBASIC24.89■■□□□ 1.57
LRRTM3Q86VH5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.88■■□□□ 1.57
LRRTM3Q86VH5 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.88■■□□□ 1.57
LRRTM3Q86VH5 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.88■■□□□ 1.57
LRRTM3Q86VH5 AC092028.1-203ENST00000608262 953 ntBASIC24.88■■□□□ 1.57
LRRTM3Q86VH5 AC131212.1-201ENST00000613771 668 ntBASIC24.88■■□□□ 1.57
LRRTM3Q86VH5 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
LRRTM3Q86VH5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.88■■□□□ 1.57
LRRTM3Q86VH5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
LRRTM3Q86VH5 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
LRRTM3Q86VH5 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.87■■□□□ 1.57
LRRTM3Q86VH5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.87■■□□□ 1.57
LRRTM3Q86VH5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
LRRTM3Q86VH5 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRTM3Q86VH5 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
LRRTM3Q86VH5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
LRRTM3Q86VH5 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
LRRTM3Q86VH5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 TSPY9P-201ENST00000440215 945 ntBASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 TSPY11P-201ENST00000442607 1045 ntBASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 GRAMD4P7-201ENST00000578182 1232 ntBASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.85■■□□□ 1.57
LRRTM3Q86VH5 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
LRRTM3Q86VH5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.84■■□□□ 1.57
LRRTM3Q86VH5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
LRRTM3Q86VH5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.84■■□□□ 1.57
LRRTM3Q86VH5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
LRRTM3Q86VH5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.84■■□□□ 1.57
LRRTM3Q86VH5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.84■■□□□ 1.57
LRRTM3Q86VH5 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
LRRTM3Q86VH5 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC24.83■■□□□ 1.57
LRRTM3Q86VH5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
LRRTM3Q86VH5 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
LRRTM3Q86VH5 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC24.83■■□□□ 1.57
LRRTM3Q86VH5 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC24.83■■□□□ 1.57
LRRTM3Q86VH5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.83■■□□□ 1.57
LRRTM3Q86VH5 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
LRRTM3Q86VH5 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.82■■□□□ 1.56
LRRTM3Q86VH5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC24.82■■□□□ 1.56
LRRTM3Q86VH5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC24.82■■□□□ 1.56
LRRTM3Q86VH5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC24.82■■□□□ 1.56
LRRTM3Q86VH5 CEBPA-AS1-201ENST00000592982 2198 ntBASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
LRRTM3Q86VH5 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.8■■□□□ 1.56
LRRTM3Q86VH5 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC24.8■■□□□ 1.56
LRRTM3Q86VH5 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
LRRTM3Q86VH5 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
LRRTM3Q86VH5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 KRT16P3-201ENST00000439127 1283 ntBASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
LRRTM3Q86VH5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms