Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
MRPL55Q7Z7F7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
MRPL55Q7Z7F7 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
MRPL55Q7Z7F7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MRPL55Q7Z7F7 PREB-202ENST00000406567 1910 ntTSL 5 BASIC14.96□□□□□ -0.02
MRPL55Q7Z7F7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
MRPL55Q7Z7F7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
MRPL55Q7Z7F7 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC14.95□□□□□ -0.02
MRPL55Q7Z7F7 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 LINC01124-201ENST00000409786 2117 ntBASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 HES4-204ENST00000484667 667 ntTSL 3 BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 RAP2CP1-202ENST00000605179 643 ntBASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
MRPL55Q7Z7F7 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
MRPL55Q7Z7F7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL55Q7Z7F7 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
MRPL55Q7Z7F7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
MRPL55Q7Z7F7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
MRPL55Q7Z7F7 AC026202.3-201ENST00000600805 1127 ntBASIC14.92□□□□□ -0.02
MRPL55Q7Z7F7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
MRPL55Q7Z7F7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL55Q7Z7F7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL55Q7Z7F7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL55Q7Z7F7 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL55Q7Z7F7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
MRPL55Q7Z7F7 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms