Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.59■■□□□ 1.85
SHC4Q6S5L8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SHC4Q6S5L8 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SHC4Q6S5L8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.59■■□□□ 1.85
SHC4Q6S5L8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.58■■□□□ 1.85
SHC4Q6S5L8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHC4Q6S5L8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHC4Q6S5L8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
SHC4Q6S5L8 KRT18P10-201ENST00000388836 1287 ntBASIC26.58■■□□□ 1.85
SHC4Q6S5L8 AL592293.1-201ENST00000502889 1188 ntBASIC26.58■■□□□ 1.85
SHC4Q6S5L8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
SHC4Q6S5L8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
SHC4Q6S5L8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC26.57■■□□□ 1.84
SHC4Q6S5L8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SHC4Q6S5L8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
SHC4Q6S5L8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC26.55■■□□□ 1.84
SHC4Q6S5L8 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SHC4Q6S5L8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC26.55■■□□□ 1.84
SHC4Q6S5L8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
SHC4Q6S5L8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SHC4Q6S5L8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.55■■□□□ 1.84
SHC4Q6S5L8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 HLA-L-211ENST00000482052 1765 ntBASIC26.54■■□□□ 1.84
SHC4Q6S5L8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SHC4Q6S5L8 AC141586.4-201ENST00000624558 1573 ntBASIC26.54■■□□□ 1.84
SHC4Q6S5L8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
SHC4Q6S5L8 AC004812.2-201ENST00000611079 2094 ntBASIC26.53■■□□□ 1.84
SHC4Q6S5L8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
SHC4Q6S5L8 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
SHC4Q6S5L8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
SHC4Q6S5L8 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SHC4Q6S5L8 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
SHC4Q6S5L8 RARRES2P2-201ENST00000394842 485 ntBASIC26.52■■□□□ 1.84
SHC4Q6S5L8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.52■■□□□ 1.84
SHC4Q6S5L8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
SHC4Q6S5L8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SHC4Q6S5L8 HSD17B1P1-201ENST00000590052 955 ntBASIC26.51■■□□□ 1.83
SHC4Q6S5L8 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SHC4Q6S5L8 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHC4Q6S5L8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
SHC4Q6S5L8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHC4Q6S5L8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.5■■□□□ 1.83
SHC4Q6S5L8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHC4Q6S5L8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.5■■□□□ 1.83
SHC4Q6S5L8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
SHC4Q6S5L8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SHC4Q6S5L8 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHC4Q6S5L8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.49■■□□□ 1.83
SHC4Q6S5L8 RPS2P7-201ENST00000447334 885 ntBASIC26.49■■□□□ 1.83
SHC4Q6S5L8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHC4Q6S5L8 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHC4Q6S5L8 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
SHC4Q6S5L8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.48■■□□□ 1.83
SHC4Q6S5L8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC26.47■■□□□ 1.83
SHC4Q6S5L8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.47■■□□□ 1.83
SHC4Q6S5L8 U85056.1-201ENST00000616429 682 ntBASIC26.47■■□□□ 1.83
SHC4Q6S5L8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SHC4Q6S5L8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHC4Q6S5L8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SHC4Q6S5L8 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SHC4Q6S5L8 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SHC4Q6S5L8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
SHC4Q6S5L8 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
SHC4Q6S5L8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
SHC4Q6S5L8 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHC4Q6S5L8 DUX4L9-201ENST00000449051 1259 ntBASIC26.45■■□□□ 1.82
SHC4Q6S5L8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.82
SHC4Q6S5L8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.45■■□□□ 1.82
SHC4Q6S5L8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHC4Q6S5L8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHC4Q6S5L8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
SHC4Q6S5L8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms