Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 UNC93B8-201ENST00000511903 705 ntBASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 AC092028.1-203ENST00000608262 953 ntBASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 AC131212.1-201ENST00000613771 668 ntBASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
H3F3CQ6NXT2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
H3F3CQ6NXT2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.73■■□□□ 1.07
H3F3CQ6NXT2 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
H3F3CQ6NXT2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
H3F3CQ6NXT2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.72■■□□□ 1.07
H3F3CQ6NXT2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
H3F3CQ6NXT2 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
H3F3CQ6NXT2 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
H3F3CQ6NXT2 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
H3F3CQ6NXT2 AC090877.2-201ENST00000558441 1738 ntBASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 CREM-210ENST00000374721 2020 ntTSL 5 BASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.69■■□□□ 1.06
H3F3CQ6NXT2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 AF131216.4-201ENST00000638924 1588 ntBASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
H3F3CQ6NXT2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
H3F3CQ6NXT2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 KRT16P3-201ENST00000439127 1283 ntBASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 DUSP8P4-201ENST00000399538 1761 ntBASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
H3F3CQ6NXT2 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H3F3CQ6NXT2 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
H3F3CQ6NXT2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC21.65■■□□□ 1.06
H3F3CQ6NXT2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
H3F3CQ6NXT2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
H3F3CQ6NXT2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.65■■□□□ 1.06
H3F3CQ6NXT2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
H3F3CQ6NXT2 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.64■■□□□ 1.05
H3F3CQ6NXT2 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H3F3CQ6NXT2 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3F3CQ6NXT2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
H3F3CQ6NXT2 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.64■■□□□ 1.05
H3F3CQ6NXT2 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3F3CQ6NXT2 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
H3F3CQ6NXT2 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.63■■□□□ 1.05
H3F3CQ6NXT2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H3F3CQ6NXT2 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
H3F3CQ6NXT2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms