Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
PPP4R3AQ6IN85 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PPP4R3AQ6IN85 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 AC022211.4-201ENST00000625094 2161 ntBASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PPP4R3AQ6IN85 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3AQ6IN85 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3AQ6IN85 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3AQ6IN85 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3AQ6IN85 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PPP4R3AQ6IN85 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.71■■□□□ 1.87
PPP4R3AQ6IN85 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.7■■□□□ 1.86
PPP4R3AQ6IN85 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.7■■□□□ 1.86
PPP4R3AQ6IN85 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
PPP4R3AQ6IN85 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.7■■□□□ 1.86
PPP4R3AQ6IN85 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R3AQ6IN85 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R3AQ6IN85 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R3AQ6IN85 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R3AQ6IN85 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PPP4R3AQ6IN85 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
PPP4R3AQ6IN85 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC26.67■■□□□ 1.86
PPP4R3AQ6IN85 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.67■■□□□ 1.86
PPP4R3AQ6IN85 MIR6089-201ENST00000616698 64 ntBASIC26.67■■□□□ 1.86
PPP4R3AQ6IN85 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PPP4R3AQ6IN85 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
PPP4R3AQ6IN85 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.67■■□□□ 1.86
PPP4R3AQ6IN85 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 KRT8P33-201ENST00000508125 1423 ntBASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 YBX1P4-201ENST00000392794 808 ntBASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
PPP4R3AQ6IN85 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PPP4R3AQ6IN85 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC26.65■■□□□ 1.86
PPP4R3AQ6IN85 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PPP4R3AQ6IN85 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.65■■□□□ 1.86
PPP4R3AQ6IN85 AC142381.3-201ENST00000568208 1670 ntBASIC26.65■■□□□ 1.86
PPP4R3AQ6IN85 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PPP4R3AQ6IN85 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
PPP4R3AQ6IN85 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PPP4R3AQ6IN85 KRT18P24-201ENST00000344739 1156 ntBASIC26.64■■□□□ 1.86
PPP4R3AQ6IN85 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PPP4R3AQ6IN85 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC26.64■■□□□ 1.86
PPP4R3AQ6IN85 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.64■■□□□ 1.86
PPP4R3AQ6IN85 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 RARRES2P1-201ENST00000474487 481 ntBASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 AC103724.3-201ENST00000564481 992 ntBASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 AC011551.1-201ENST00000614101 683 ntBASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PPP4R3AQ6IN85 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.62■■□□□ 1.85
PPP4R3AQ6IN85 AC090877.2-201ENST00000558441 1738 ntBASIC26.62■■□□□ 1.85
PPP4R3AQ6IN85 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.62■■□□□ 1.85
PPP4R3AQ6IN85 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC26.62■■□□□ 1.85
PPP4R3AQ6IN85 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PPP4R3AQ6IN85 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PPP4R3AQ6IN85 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PPP4R3AQ6IN85 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PPP4R3AQ6IN85 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC26.61■■□□□ 1.85
PPP4R3AQ6IN85 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
PPP4R3AQ6IN85 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
PPP4R3AQ6IN85 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.6■■□□□ 1.85
PPP4R3AQ6IN85 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC26.6■■□□□ 1.85
PPP4R3AQ6IN85 AC120024.1-201ENST00000562672 995 ntBASIC26.6■■□□□ 1.85
PPP4R3AQ6IN85 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
PPP4R3AQ6IN85 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PPP4R3AQ6IN85 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PPP4R3AQ6IN85 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.59■■□□□ 1.85
PPP4R3AQ6IN85 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.59■■□□□ 1.85
PPP4R3AQ6IN85 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.59■■□□□ 1.85
PPP4R3AQ6IN85 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PPP4R3AQ6IN85 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
PPP4R3AQ6IN85 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC26.58■■□□□ 1.85
PPP4R3AQ6IN85 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
PPP4R3AQ6IN85 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.57■■□□□ 1.84
PPP4R3AQ6IN85 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.57■■□□□ 1.84
PPP4R3AQ6IN85 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PPP4R3AQ6IN85 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
PPP4R3AQ6IN85 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PPP4R3AQ6IN85 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms