Protein–RNA interactions for Protein: Q5R3I4

TTC38, Tetratricopeptide repeat protein 38, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38Q5R3I4 AC139795.1-202ENST00000500444 432 ntBASIC26.77■■□□□ 1.88
TTC38Q5R3I4 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC26.77■■□□□ 1.88
TTC38Q5R3I4 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC26.77■■□□□ 1.88
TTC38Q5R3I4 AC012354.3-201ENST00000623734 483 ntBASIC26.77■■□□□ 1.88
TTC38Q5R3I4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
TTC38Q5R3I4 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.76■■□□□ 1.88
TTC38Q5R3I4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TTC38Q5R3I4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.76■■□□□ 1.87
TTC38Q5R3I4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.76■■□□□ 1.87
TTC38Q5R3I4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TTC38Q5R3I4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.76■■□□□ 1.87
TTC38Q5R3I4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TTC38Q5R3I4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.76■■□□□ 1.87
TTC38Q5R3I4 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.75■■□□□ 1.87
TTC38Q5R3I4 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC26.75■■□□□ 1.87
TTC38Q5R3I4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TTC38Q5R3I4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
TTC38Q5R3I4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
TTC38Q5R3I4 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC26.75■■□□□ 1.87
TTC38Q5R3I4 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
TTC38Q5R3I4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TTC38Q5R3I4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
TTC38Q5R3I4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
TTC38Q5R3I4 AL592295.1-201ENST00000400984 884 ntBASIC26.73■■□□□ 1.87
TTC38Q5R3I4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TTC38Q5R3I4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
TTC38Q5R3I4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.73■■□□□ 1.87
TTC38Q5R3I4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC26.73■■□□□ 1.87
TTC38Q5R3I4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
TTC38Q5R3I4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
TTC38Q5R3I4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 GUK1-208ENST00000366728 842 ntTSL 2 BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC26.71■■□□□ 1.87
TTC38Q5R3I4 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC38Q5R3I4 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TTC38Q5R3I4 AL033527.3-201ENST00000566366 1196 ntBASIC26.7■■□□□ 1.86
TTC38Q5R3I4 BHLHE23-202ENST00000612929 1109 ntBASIC26.7■■□□□ 1.86
TTC38Q5R3I4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC38Q5R3I4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC26.7■■□□□ 1.86
TTC38Q5R3I4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC38Q5R3I4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.7■■□□□ 1.86
TTC38Q5R3I4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TTC38Q5R3I4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC38Q5R3I4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC38Q5R3I4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC38Q5R3I4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC38Q5R3I4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TTC38Q5R3I4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TTC38Q5R3I4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC38Q5R3I4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC38Q5R3I4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TTC38Q5R3I4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC38Q5R3I4 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC38Q5R3I4 AC019171.1-201ENST00000601251 1056 ntBASIC26.68■■□□□ 1.86
TTC38Q5R3I4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC38Q5R3I4 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
TTC38Q5R3I4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
TTC38Q5R3I4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC26.67■■□□□ 1.86
TTC38Q5R3I4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
TTC38Q5R3I4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC38Q5R3I4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC38Q5R3I4 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC38Q5R3I4 PVT1_1.1-201ENST00000615125 194 ntBASIC26.66■■□□□ 1.86
TTC38Q5R3I4 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC38Q5R3I4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC38Q5R3I4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC38Q5R3I4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.66■■□□□ 1.86
TTC38Q5R3I4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC38Q5R3I4 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC38Q5R3I4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC38Q5R3I4 LINC01124-201ENST00000409786 2117 ntBASIC26.65■■□□□ 1.86
TTC38Q5R3I4 AC093323.1-202ENST00000635031 2045 ntBASIC26.65■■□□□ 1.86
TTC38Q5R3I4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
TTC38Q5R3I4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TTC38Q5R3I4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC38Q5R3I4 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TTC38Q5R3I4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC38Q5R3I4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC38Q5R3I4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.86
TTC38Q5R3I4 AC010980.1-201ENST00000587192 1142 ntBASIC26.64■■□□□ 1.86
TTC38Q5R3I4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TTC38Q5R3I4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC26.64■■□□□ 1.86
TTC38Q5R3I4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC26.64■■□□□ 1.86
TTC38Q5R3I4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms