Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC28.5■■■□□ 2.15
PDS5AQ29RF7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PDS5AQ29RF7 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC28.49■■■□□ 2.15
PDS5AQ29RF7 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC28.49■■■□□ 2.15
PDS5AQ29RF7 GRAMD4P7-201ENST00000578182 1232 ntBASIC28.49■■■□□ 2.15
PDS5AQ29RF7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PDS5AQ29RF7 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC28.49■■■□□ 2.15
PDS5AQ29RF7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
PDS5AQ29RF7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
PDS5AQ29RF7 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
PDS5AQ29RF7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PDS5AQ29RF7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC28.47■■■□□ 2.15
PDS5AQ29RF7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC28.47■■■□□ 2.15
PDS5AQ29RF7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
PDS5AQ29RF7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC28.47■■■□□ 2.15
PDS5AQ29RF7 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
PDS5AQ29RF7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
PDS5AQ29RF7 KRT16P3-201ENST00000439127 1283 ntBASIC28.46■■■□□ 2.15
PDS5AQ29RF7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC28.46■■■□□ 2.15
PDS5AQ29RF7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDS5AQ29RF7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC28.46■■■□□ 2.15
PDS5AQ29RF7 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
PDS5AQ29RF7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC28.45■■■□□ 2.15
PDS5AQ29RF7 TK2-202ENST00000417693 1046 ntTSL 2 BASIC28.45■■■□□ 2.15
PDS5AQ29RF7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC28.45■■■□□ 2.15
PDS5AQ29RF7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC28.45■■■□□ 2.15
PDS5AQ29RF7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.14
PDS5AQ29RF7 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
PDS5AQ29RF7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC28.45■■■□□ 2.14
PDS5AQ29RF7 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
PDS5AQ29RF7 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
PDS5AQ29RF7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PDS5AQ29RF7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PDS5AQ29RF7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
PDS5AQ29RF7 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC28.43■■■□□ 2.14
PDS5AQ29RF7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
PDS5AQ29RF7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
PDS5AQ29RF7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC28.42■■■□□ 2.14
PDS5AQ29RF7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PDS5AQ29RF7 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
PDS5AQ29RF7 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC28.42■■■□□ 2.14
PDS5AQ29RF7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC28.42■■■□□ 2.14
PDS5AQ29RF7 AC091060.1-201ENST00000623524 1766 ntBASIC28.42■■■□□ 2.14
PDS5AQ29RF7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 AC145676.1-201ENST00000514988 2004 ntBASIC28.41■■■□□ 2.14
PDS5AQ29RF7 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 TSPY9P-201ENST00000440215 945 ntBASIC28.41■■■□□ 2.14
PDS5AQ29RF7 TSPY11P-201ENST00000442607 1045 ntBASIC28.41■■■□□ 2.14
PDS5AQ29RF7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC28.41■■■□□ 2.14
PDS5AQ29RF7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PDS5AQ29RF7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
PDS5AQ29RF7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
PDS5AQ29RF7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
PDS5AQ29RF7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC28.38■■■□□ 2.13
PDS5AQ29RF7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PDS5AQ29RF7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
PDS5AQ29RF7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
PDS5AQ29RF7 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC28.37■■■□□ 2.13
PDS5AQ29RF7 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC28.37■■■□□ 2.13
PDS5AQ29RF7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
PDS5AQ29RF7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.36■■■□□ 2.13
PDS5AQ29RF7 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDS5AQ29RF7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC28.36■■■□□ 2.13
PDS5AQ29RF7 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
PDS5AQ29RF7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PDS5AQ29RF7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC28.35■■■□□ 2.13
PDS5AQ29RF7 AC010997.5-201ENST00000609182 354 ntBASIC28.35■■■□□ 2.13
PDS5AQ29RF7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
PDS5AQ29RF7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
PDS5AQ29RF7 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDS5AQ29RF7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.34■■■□□ 2.13
PDS5AQ29RF7 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC28.34■■■□□ 2.13
PDS5AQ29RF7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC28.34■■■□□ 2.13
PDS5AQ29RF7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC28.34■■■□□ 2.13
PDS5AQ29RF7 MTDHP2-201ENST00000601468 714 ntBASIC28.34■■■□□ 2.13
PDS5AQ29RF7 MIR6089-201ENST00000616698 64 ntBASIC28.34■■■□□ 2.13
PDS5AQ29RF7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms