Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20■□□□□ 0.79
UBA52P62987 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
UBA52P62987 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20■□□□□ 0.79
UBA52P62987 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBA52P62987 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
UBA52P62987 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
UBA52P62987 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBA52P62987 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC19.99■□□□□ 0.79
UBA52P62987 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
UBA52P62987 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.99■□□□□ 0.79
UBA52P62987 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC19.99■□□□□ 0.79
UBA52P62987 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
UBA52P62987 AC026202.3-201ENST00000600805 1127 ntBASIC19.99■□□□□ 0.79
UBA52P62987 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBA52P62987 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
UBA52P62987 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
UBA52P62987 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
UBA52P62987 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBA52P62987 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBA52P62987 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBA52P62987 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBA52P62987 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
UBA52P62987 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
UBA52P62987 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
UBA52P62987 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
UBA52P62987 WHAMMP3-201ENST00000611636 1609 ntBASIC19.98■□□□□ 0.79
UBA52P62987 AL035685.1-201ENST00000636663 812 ntBASIC19.97■□□□□ 0.79
UBA52P62987 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBA52P62987 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
UBA52P62987 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
UBA52P62987 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.97■□□□□ 0.79
UBA52P62987 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.96■□□□□ 0.79
UBA52P62987 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA52P62987 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
UBA52P62987 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA52P62987 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA52P62987 AC025884.2-201ENST00000553429 711 ntBASIC19.96■□□□□ 0.79
UBA52P62987 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.96■□□□□ 0.79
UBA52P62987 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA52P62987 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
UBA52P62987 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA52P62987 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA52P62987 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA52P62987 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA52P62987 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA52P62987 RP9P-202ENST00000450133 1212 ntBASIC19.95■□□□□ 0.78
UBA52P62987 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA52P62987 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA52P62987 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA52P62987 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
UBA52P62987 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA52P62987 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.95■□□□□ 0.78
UBA52P62987 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA52P62987 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
UBA52P62987 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
UBA52P62987 AL451085.2-201ENST00000605085 799 ntBASIC19.94■□□□□ 0.78
UBA52P62987 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.94■□□□□ 0.78
UBA52P62987 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
UBA52P62987 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 DUX4L9-201ENST00000449051 1259 ntBASIC19.93■□□□□ 0.78
UBA52P62987 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.93■□□□□ 0.78
UBA52P62987 BHLHE23-202ENST00000612929 1109 ntBASIC19.93■□□□□ 0.78
UBA52P62987 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
UBA52P62987 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
UBA52P62987 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA52P62987 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.92■□□□□ 0.78
UBA52P62987 AC093536.1-201ENST00000569153 554 ntBASIC19.92■□□□□ 0.78
UBA52P62987 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
UBA52P62987 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
UBA52P62987 AC097639.1-201ENST00000565519 1891 ntBASIC19.92■□□□□ 0.78
UBA52P62987 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.92■□□□□ 0.78
UBA52P62987 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
UBA52P62987 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA52P62987 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.91■□□□□ 0.78
UBA52P62987 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
UBA52P62987 AC010501.1-201ENST00000606270 1962 ntBASIC19.91■□□□□ 0.78
UBA52P62987 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA52P62987 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
UBA52P62987 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA52P62987 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
UBA52P62987 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA52P62987 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA52P62987 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA52P62987 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.9■□□□□ 0.78
UBA52P62987 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
UBA52P62987 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA52P62987 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA52P62987 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
UBA52P62987 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
UBA52P62987 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
UBA52P62987 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms