Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
CDC34P49427 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.42■□□□□ 0.54
CDC34P49427 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.42■□□□□ 0.54
CDC34P49427 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDC34P49427 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDC34P49427 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.41■□□□□ 0.54
CDC34P49427 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.41■□□□□ 0.54
CDC34P49427 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC34P49427 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC34P49427 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC34P49427 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDC34P49427 NFE2L3P1-201ENST00000588207 1959 ntBASIC18.41■□□□□ 0.54
CDC34P49427 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDC34P49427 AL359258.2-201ENST00000564063 1566 ntBASIC18.41■□□□□ 0.54
CDC34P49427 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.41■□□□□ 0.54
CDC34P49427 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDC34P49427 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDC34P49427 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
CDC34P49427 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.4■□□□□ 0.54
CDC34P49427 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC34P49427 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC18.4■□□□□ 0.54
CDC34P49427 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC34P49427 C9orf163-202ENST00000624034 2573 ntBASIC18.4■□□□□ 0.54
CDC34P49427 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC34P49427 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC34P49427 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDC34P49427 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDC34P49427 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDC34P49427 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDC34P49427 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDC34P49427 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDC34P49427 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC34P49427 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDC34P49427 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC34P49427 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
CDC34P49427 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC34P49427 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC34P49427 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC18.39■□□□□ 0.53
CDC34P49427 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDC34P49427 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDC34P49427 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.39■□□□□ 0.53
CDC34P49427 MIR219A2-201ENST00000608502 1504 ntBASIC18.39■□□□□ 0.53
CDC34P49427 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDC34P49427 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDC34P49427 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.38■□□□□ 0.53
CDC34P49427 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC34P49427 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.38■□□□□ 0.53
CDC34P49427 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CDC34P49427 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDC34P49427 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC34P49427 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC34P49427 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CDC34P49427 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC34P49427 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC34P49427 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC34P49427 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.37■□□□□ 0.53
CDC34P49427 AP006261.1-201ENST00000584783 668 ntBASIC18.37■□□□□ 0.53
CDC34P49427 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC34P49427 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC34P49427 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC34P49427 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC34P49427 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC34P49427 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CDC34P49427 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC34P49427 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CDC34P49427 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
CDC34P49427 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC34P49427 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC34P49427 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC34P49427 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC34P49427 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC34P49427 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC34P49427 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDC34P49427 AC087741.3-201ENST00000624270 1347 ntBASIC18.36■□□□□ 0.53
CDC34P49427 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC34P49427 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC34P49427 AL117328.2-201ENST00000624617 1940 ntBASIC18.35■□□□□ 0.53
CDC34P49427 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC34P49427 AC044849.2-201ENST00000606596 710 ntBASIC18.35■□□□□ 0.53
CDC34P49427 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC34P49427 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC34P49427 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC34P49427 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC34P49427 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms