Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CD28P10747 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CD28P10747 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.34■□□□□ 0.53
CD28P10747 SENP5-202ENST00000419026 973 ntTSL 3 BASIC18.34■□□□□ 0.53
CD28P10747 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CD28P10747 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.34■□□□□ 0.53
CD28P10747 MTDHP2-201ENST00000601468 714 ntBASIC18.34■□□□□ 0.53
CD28P10747 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CD28P10747 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD28P10747 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD28P10747 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CD28P10747 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC18.33■□□□□ 0.53
CD28P10747 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CD28P10747 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CD28P10747 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CD28P10747 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.33■□□□□ 0.52
CD28P10747 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.33■□□□□ 0.52
CD28P10747 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.33■□□□□ 0.52
CD28P10747 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.33■□□□□ 0.52
CD28P10747 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD28P10747 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.33■□□□□ 0.52
CD28P10747 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.52
CD28P10747 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CD28P10747 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
CD28P10747 ERN1-208ENST00000606895 2068 ntBASIC18.32■□□□□ 0.52
CD28P10747 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD28P10747 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CD28P10747 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC18.32■□□□□ 0.52
CD28P10747 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD28P10747 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CD28P10747 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.32■□□□□ 0.52
CD28P10747 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.32■□□□□ 0.52
CD28P10747 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.32■□□□□ 0.52
CD28P10747 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.32■□□□□ 0.52
CD28P10747 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.32■□□□□ 0.52
CD28P10747 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.32■□□□□ 0.52
CD28P10747 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD28P10747 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CD28P10747 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CD28P10747 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.32■□□□□ 0.52
CD28P10747 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD28P10747 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CD28P10747 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.31■□□□□ 0.52
CD28P10747 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.31■□□□□ 0.52
CD28P10747 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CD28P10747 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC18.31■□□□□ 0.52
CD28P10747 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD28P10747 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD28P10747 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CD28P10747 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CD28P10747 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CD28P10747 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD28P10747 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD28P10747 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD28P10747 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CD28P10747 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD28P10747 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CD28P10747 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.29■□□□□ 0.52
CD28P10747 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.29■□□□□ 0.52
CD28P10747 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.29■□□□□ 0.52
CD28P10747 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD28P10747 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.29■□□□□ 0.52
CD28P10747 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD28P10747 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CD28P10747 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD28P10747 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CD28P10747 AC096887.2-201ENST00000623443 1957 ntBASIC18.28■□□□□ 0.52
CD28P10747 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.28■□□□□ 0.52
CD28P10747 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD28P10747 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CD28P10747 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CD28P10747 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.28■□□□□ 0.52
CD28P10747 AC131281.2-201ENST00000520478 145 ntBASIC18.28■□□□□ 0.52
CD28P10747 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.28■□□□□ 0.52
CD28P10747 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.28■□□□□ 0.52
CD28P10747 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.28■□□□□ 0.52
CD28P10747 MIR6724-1-201ENST00000616420 92 ntBASIC18.28■□□□□ 0.52
CD28P10747 MIR6724-2-201ENST00000616483 92 ntBASIC18.28■□□□□ 0.52
CD28P10747 MIR6724-4-201ENST00000617390 92 ntBASIC18.28■□□□□ 0.52
CD28P10747 MIR6724-3-201ENST00000622482 92 ntBASIC18.28■□□□□ 0.52
CD28P10747 AL117332.1-201ENST00000622628 974 ntBASIC18.28■□□□□ 0.52
CD28P10747 AF131216.4-201ENST00000638924 1588 ntBASIC18.28■□□□□ 0.52
CD28P10747 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.28■□□□□ 0.52
CD28P10747 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD28P10747 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CD28P10747 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.27■□□□□ 0.52
CD28P10747 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CD28P10747 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CD28P10747 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC18.27■□□□□ 0.52
CD28P10747 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CD28P10747 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CD28P10747 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CD28P10747 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.26■□□□□ 0.51
CD28P10747 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CD28P10747 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.26■□□□□ 0.51
CD28P10747 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.26■□□□□ 0.51
CD28P10747 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.26■□□□□ 0.51
CD28P10747 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CD28P10747 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.26■□□□□ 0.51
CD28P10747 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms