Protein–RNA interactions for Protein: P0DJI8

SAA1, Serum amyloid A-1 protein, humanhuman

Predicted RBP Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA1P0DJI8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA1P0DJI8 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.86■□□□□ 0.61
SAA1P0DJI8 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA1P0DJI8 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.86■□□□□ 0.61
SAA1P0DJI8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SAA1P0DJI8 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
SAA1P0DJI8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC18.86■□□□□ 0.61
SAA1P0DJI8 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.86■□□□□ 0.61
SAA1P0DJI8 LINC00543-201ENST00000567234 1845 ntBASIC18.86■□□□□ 0.61
SAA1P0DJI8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SAA1P0DJI8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SAA1P0DJI8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA1P0DJI8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SAA1P0DJI8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.85■□□□□ 0.61
SAA1P0DJI8 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA1P0DJI8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SAA1P0DJI8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SAA1P0DJI8 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.85■□□□□ 0.61
SAA1P0DJI8 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SAA1P0DJI8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SAA1P0DJI8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA1P0DJI8 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
SAA1P0DJI8 RARRES2P2-201ENST00000394842 485 ntBASIC18.84■□□□□ 0.61
SAA1P0DJI8 AL592293.1-201ENST00000502889 1188 ntBASIC18.84■□□□□ 0.61
SAA1P0DJI8 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
SAA1P0DJI8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SAA1P0DJI8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SAA1P0DJI8 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA1P0DJI8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA1P0DJI8 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA1P0DJI8 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA1P0DJI8 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA1P0DJI8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SAA1P0DJI8 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA1P0DJI8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SAA1P0DJI8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
SAA1P0DJI8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA1P0DJI8 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SAA1P0DJI8 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SAA1P0DJI8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SAA1P0DJI8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC18.83■□□□□ 0.6
SAA1P0DJI8 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SAA1P0DJI8 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SAA1P0DJI8 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAA1P0DJI8 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA1P0DJI8 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA1P0DJI8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAA1P0DJI8 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC18.82■□□□□ 0.6
SAA1P0DJI8 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAA1P0DJI8 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SAA1P0DJI8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA1P0DJI8 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA1P0DJI8 AC141586.4-201ENST00000624558 1573 ntBASIC18.81■□□□□ 0.6
SAA1P0DJI8 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.81■□□□□ 0.6
SAA1P0DJI8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAA1P0DJI8 HSD17B1P1-201ENST00000590052 955 ntBASIC18.81■□□□□ 0.6
SAA1P0DJI8 AC018755.3-202ENST00000596210 929 ntBASIC18.81■□□□□ 0.6
SAA1P0DJI8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAA1P0DJI8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
SAA1P0DJI8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC18.81■□□□□ 0.6
SAA1P0DJI8 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC18.81■□□□□ 0.6
SAA1P0DJI8 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SAA1P0DJI8 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SAA1P0DJI8 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAA1P0DJI8 SPCS2P3-201ENST00000500401 656 ntBASIC18.8■□□□□ 0.6
SAA1P0DJI8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAA1P0DJI8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA1P0DJI8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAA1P0DJI8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SAA1P0DJI8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.8■□□□□ 0.6
SAA1P0DJI8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAA1P0DJI8 RPS2P7-201ENST00000447334 885 ntBASIC18.79■□□□□ 0.6
SAA1P0DJI8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.79■□□□□ 0.6
SAA1P0DJI8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SAA1P0DJI8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.79■□□□□ 0.6
SAA1P0DJI8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA1P0DJI8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA1P0DJI8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA1P0DJI8 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA1P0DJI8 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SAA1P0DJI8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
SAA1P0DJI8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAA1P0DJI8 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC18.78■□□□□ 0.6
SAA1P0DJI8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC18.78■□□□□ 0.6
SAA1P0DJI8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC18.78■□□□□ 0.6
SAA1P0DJI8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.78■□□□□ 0.6
SAA1P0DJI8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA1P0DJI8 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA1P0DJI8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA1P0DJI8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SAA1P0DJI8 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SAA1P0DJI8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.77■□□□□ 0.6
SAA1P0DJI8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
SAA1P0DJI8 HLA-L-211ENST00000482052 1765 ntBASIC18.77■□□□□ 0.6
SAA1P0DJI8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC18.77■□□□□ 0.6
SAA1P0DJI8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SAA1P0DJI8 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SAA1P0DJI8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
SAA1P0DJI8 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SAA1P0DJI8 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms