Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC31.09■■■□□ 2.57
APAF1O14727 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
APAF1O14727 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
APAF1O14727 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
APAF1O14727 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC31.08■■■□□ 2.57
APAF1O14727 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.08■■■□□ 2.57
APAF1O14727 AC103834.1-201ENST00000520383 144 ntBASIC31.08■■■□□ 2.57
APAF1O14727 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC31.08■■■□□ 2.57
APAF1O14727 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
APAF1O14727 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
APAF1O14727 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC31.08■■■□□ 2.57
APAF1O14727 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
APAF1O14727 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
APAF1O14727 AL592295.1-201ENST00000400984 884 ntBASIC31.07■■■□□ 2.56
APAF1O14727 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC31.07■■■□□ 2.56
APAF1O14727 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
APAF1O14727 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
APAF1O14727 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
APAF1O14727 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.06■■■□□ 2.56
APAF1O14727 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
APAF1O14727 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC31.05■■■□□ 2.56
APAF1O14727 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
APAF1O14727 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
APAF1O14727 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC31.05■■■□□ 2.56
APAF1O14727 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
APAF1O14727 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC31.04■■■□□ 2.56
APAF1O14727 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.04■■■□□ 2.56
APAF1O14727 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC31.04■■■□□ 2.56
APAF1O14727 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
APAF1O14727 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC31.03■■■□□ 2.56
APAF1O14727 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
APAF1O14727 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
APAF1O14727 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
APAF1O14727 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
APAF1O14727 KRT8P33-201ENST00000508125 1423 ntBASIC31.03■■■□□ 2.56
APAF1O14727 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC31.03■■■□□ 2.56
APAF1O14727 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
APAF1O14727 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
APAF1O14727 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.02■■■□□ 2.56
APAF1O14727 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC31.02■■■□□ 2.56
APAF1O14727 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
APAF1O14727 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
APAF1O14727 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC31.01■■■□□ 2.55
APAF1O14727 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC31.01■■■□□ 2.55
APAF1O14727 MIR6089-201ENST00000616698 64 ntBASIC31.01■■■□□ 2.55
APAF1O14727 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.01■■■□□ 2.55
APAF1O14727 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
APAF1O14727 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31■■■□□ 2.55
APAF1O14727 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC31■■■□□ 2.55
APAF1O14727 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC30.99■■■□□ 2.55
APAF1O14727 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
APAF1O14727 MIR4508-201ENST00000584178 70 ntBASIC30.99■■■□□ 2.55
APAF1O14727 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC30.99■■■□□ 2.55
APAF1O14727 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.99■■■□□ 2.55
APAF1O14727 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
APAF1O14727 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
APAF1O14727 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.98■■■□□ 2.55
APAF1O14727 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
APAF1O14727 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC30.98■■■□□ 2.55
APAF1O14727 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC30.98■■■□□ 2.55
APAF1O14727 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
APAF1O14727 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
APAF1O14727 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
APAF1O14727 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
APAF1O14727 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.97■■■□□ 2.55
APAF1O14727 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
APAF1O14727 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC30.96■■■□□ 2.55
APAF1O14727 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
APAF1O14727 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
APAF1O14727 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC30.96■■■□□ 2.55
APAF1O14727 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
APAF1O14727 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.95■■■□□ 2.55
APAF1O14727 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
APAF1O14727 AC022616.5-201ENST00000518796 181 ntBASIC30.95■■■□□ 2.55
APAF1O14727 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
APAF1O14727 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
APAF1O14727 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
APAF1O14727 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
APAF1O14727 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
APAF1O14727 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.93■■■□□ 2.54
APAF1O14727 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
APAF1O14727 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.93■■■□□ 2.54
APAF1O14727 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC30.93■■■□□ 2.54
APAF1O14727 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
APAF1O14727 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
APAF1O14727 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.93■■■□□ 2.54
APAF1O14727 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
APAF1O14727 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
APAF1O14727 AP003733.4-201ENST00000623785 1697 ntBASIC30.93■■■□□ 2.54
APAF1O14727 AC090877.2-201ENST00000558441 1738 ntBASIC30.93■■■□□ 2.54
APAF1O14727 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
APAF1O14727 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
APAF1O14727 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
APAF1O14727 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
APAF1O14727 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
APAF1O14727 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
APAF1O14727 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
APAF1O14727 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC30.91■■■□□ 2.54
APAF1O14727 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
APAF1O14727 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms