Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SBNO1A3KN83 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
SBNO1A3KN83 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SBNO1A3KN83 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SBNO1A3KN83 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
SBNO1A3KN83 SNAI3-AS1-204ENST00000567997 2048 ntBASIC32.36■■■□□ 2.77
SBNO1A3KN83 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC32.36■■■□□ 2.77
SBNO1A3KN83 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
SBNO1A3KN83 SNX5-217ENST00000606557 1087 ntBASIC32.36■■■□□ 2.77
SBNO1A3KN83 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC32.36■■■□□ 2.77
SBNO1A3KN83 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC32.35■■■□□ 2.77
SBNO1A3KN83 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC32.35■■■□□ 2.77
SBNO1A3KN83 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC32.35■■■□□ 2.77
SBNO1A3KN83 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
SBNO1A3KN83 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC32.34■■■□□ 2.77
SBNO1A3KN83 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
SBNO1A3KN83 UNC93B3-201ENST00000308076 687 ntBASIC32.33■■■□□ 2.77
SBNO1A3KN83 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC32.33■■■□□ 2.77
SBNO1A3KN83 MIR6722-201ENST00000617286 78 ntBASIC32.33■■■□□ 2.77
SBNO1A3KN83 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
SBNO1A3KN83 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC32.32■■■□□ 2.77
SBNO1A3KN83 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC32.32■■■□□ 2.77
SBNO1A3KN83 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC32.32■■■□□ 2.77
SBNO1A3KN83 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SBNO1A3KN83 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SBNO1A3KN83 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SBNO1A3KN83 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC32.32■■■□□ 2.76
SBNO1A3KN83 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC32.32■■■□□ 2.76
SBNO1A3KN83 AL136162.1-201ENST00000607711 1078 ntBASIC32.32■■■□□ 2.76
SBNO1A3KN83 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC32.31■■■□□ 2.76
SBNO1A3KN83 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC32.31■■■□□ 2.76
SBNO1A3KN83 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC32.31■■■□□ 2.76
SBNO1A3KN83 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SBNO1A3KN83 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SBNO1A3KN83 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SBNO1A3KN83 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC32.3■■■□□ 2.76
SBNO1A3KN83 LGR4-203ENST00000480977 492 ntTSL 2 BASIC32.3■■■□□ 2.76
SBNO1A3KN83 AC104564.3-201ENST00000582367 638 ntBASIC32.3■■■□□ 2.76
SBNO1A3KN83 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SBNO1A3KN83 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC32.3■■■□□ 2.76
SBNO1A3KN83 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC32.3■■■□□ 2.76
SBNO1A3KN83 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SBNO1A3KN83 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC32.29■■■□□ 2.76
SBNO1A3KN83 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC32.29■■■□□ 2.76
SBNO1A3KN83 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SBNO1A3KN83 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
SBNO1A3KN83 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC32.29■■■□□ 2.76
SBNO1A3KN83 EDA-201ENST00000338901 1233 ntBASIC32.28■■■□□ 2.76
SBNO1A3KN83 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC32.28■■■□□ 2.76
SBNO1A3KN83 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC32.28■■■□□ 2.76
SBNO1A3KN83 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SBNO1A3KN83 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC32.28■■■□□ 2.76
SBNO1A3KN83 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC32.27■■■□□ 2.76
SBNO1A3KN83 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SBNO1A3KN83 MIR5787-201ENST00000611784 55 ntBASIC32.27■■■□□ 2.76
SBNO1A3KN83 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SBNO1A3KN83 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC32.26■■■□□ 2.76
SBNO1A3KN83 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.76
SBNO1A3KN83 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
SBNO1A3KN83 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC32.26■■■□□ 2.75
SBNO1A3KN83 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
SBNO1A3KN83 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC32.26■■■□□ 2.75
SBNO1A3KN83 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SBNO1A3KN83 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC32.25■■■□□ 2.75
SBNO1A3KN83 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC32.24■■■□□ 2.75
SBNO1A3KN83 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SBNO1A3KN83 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC32.24■■■□□ 2.75
SBNO1A3KN83 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SBNO1A3KN83 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
SBNO1A3KN83 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SBNO1A3KN83 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SBNO1A3KN83 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC32.23■■■□□ 2.75
SBNO1A3KN83 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
SBNO1A3KN83 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
SBNO1A3KN83 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC32.22■■■□□ 2.75
SBNO1A3KN83 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
SBNO1A3KN83 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
SBNO1A3KN83 SHF-206ENST00000560471 2499 ntTSL 5 BASIC32.22■■■□□ 2.75
SBNO1A3KN83 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC32.21■■■□□ 2.75
SBNO1A3KN83 AC024257.2-201ENST00000549699 147 ntBASIC32.21■■■□□ 2.75
SBNO1A3KN83 AL355001.2-201ENST00000620617 1191 ntBASIC32.21■■■□□ 2.75
SBNO1A3KN83 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SBNO1A3KN83 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.75
SBNO1A3KN83 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SBNO1A3KN83 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SBNO1A3KN83 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SBNO1A3KN83 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SBNO1A3KN83 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SBNO1A3KN83 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SBNO1A3KN83 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SBNO1A3KN83 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
SBNO1A3KN83 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
SBNO1A3KN83 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC32.18■■■□□ 2.74
SBNO1A3KN83 FOXO3B-201ENST00000395675 1928 ntBASIC32.18■■■□□ 2.74
SBNO1A3KN83 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
SBNO1A3KN83 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SBNO1A3KN83 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SBNO1A3KN83 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SBNO1A3KN83 SRD5A1P1-201ENST00000442297 786 ntBASIC32.17■■■□□ 2.74
SBNO1A3KN83 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms