Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
SH3PXD2BA1X283 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
SH3PXD2BA1X283 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
SH3PXD2BA1X283 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3PXD2BA1X283 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3PXD2BA1X283 LINC01124-201ENST00000409786 2117 ntBASIC21.8■■□□□ 1.08
SH3PXD2BA1X283 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.8■■□□□ 1.08
SH3PXD2BA1X283 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3PXD2BA1X283 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
SH3PXD2BA1X283 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
SH3PXD2BA1X283 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC21.79■■□□□ 1.08
SH3PXD2BA1X283 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3PXD2BA1X283 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3PXD2BA1X283 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3PXD2BA1X283 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3PXD2BA1X283 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SH3PXD2BA1X283 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SH3PXD2BA1X283 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SH3PXD2BA1X283 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.77■■□□□ 1.08
SH3PXD2BA1X283 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3PXD2BA1X283 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3PXD2BA1X283 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SH3PXD2BA1X283 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.77■■□□□ 1.07
SH3PXD2BA1X283 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SH3PXD2BA1X283 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
SH3PXD2BA1X283 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SH3PXD2BA1X283 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.73■■□□□ 1.07
SH3PXD2BA1X283 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.72■■□□□ 1.07
SH3PXD2BA1X283 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3PXD2BA1X283 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SH3PXD2BA1X283 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SH3PXD2BA1X283 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms