Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
A0A1W2PRF3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
A0A1W2PRF3 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
A0A1W2PRF3 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
A0A1W2PRF3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
A0A1W2PRF3 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
A0A1W2PRF3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
A0A1W2PRF3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
A0A1W2PRF3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
A0A1W2PRF3 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.21■□□□□ 0.67
A0A1W2PRF3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
A0A1W2PRF3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
A0A1W2PRF3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
A0A1W2PRF3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
A0A1W2PRF3 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
A0A1W2PRF3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
A0A1W2PRF3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.2■□□□□ 0.66
A0A1W2PRF3 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
A0A1W2PRF3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
A0A1W2PRF3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.19■□□□□ 0.66
A0A1W2PRF3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.19■□□□□ 0.66
A0A1W2PRF3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.19■□□□□ 0.66
A0A1W2PRF3 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.19■□□□□ 0.66
A0A1W2PRF3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
A0A1W2PRF3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
A0A1W2PRF3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC19.18■□□□□ 0.66
A0A1W2PRF3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
A0A1W2PRF3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
A0A1W2PRF3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
A0A1W2PRF3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
A0A1W2PRF3 AC239859.2-201ENST00000444165 318 ntBASIC19.18■□□□□ 0.66
A0A1W2PRF3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC19.18■□□□□ 0.66
A0A1W2PRF3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
A0A1W2PRF3 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
A0A1W2PRF3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
A0A1W2PRF3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
A0A1W2PRF3 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
A0A1W2PRF3 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
A0A1W2PRF3 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
A0A1W2PRF3 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
A0A1W2PRF3 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.17■□□□□ 0.66
A0A1W2PRF3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
A0A1W2PRF3 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
A0A1W2PRF3 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
A0A1W2PRF3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
A0A1W2PRF3 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
A0A1W2PRF3 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
A0A1W2PRF3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
A0A1W2PRF3 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
A0A1W2PRF3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
A0A1W2PRF3 KRT18P24-201ENST00000344739 1156 ntBASIC19.16■□□□□ 0.66
A0A1W2PRF3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
A0A1W2PRF3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.16■□□□□ 0.66
A0A1W2PRF3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
A0A1W2PRF3 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
A0A1W2PRF3 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
A0A1W2PRF3 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
A0A1W2PRF3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.15■□□□□ 0.66
A0A1W2PRF3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
A0A1W2PRF3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
A0A1W2PRF3 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
A0A1W2PRF3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
A0A1W2PRF3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.14■□□□□ 0.66
A0A1W2PRF3 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
A0A1W2PRF3 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
A0A1W2PRF3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.14■□□□□ 0.65
A0A1W2PRF3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
A0A1W2PRF3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC19.14■□□□□ 0.65
A0A1W2PRF3 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
A0A1W2PRF3 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.14■□□□□ 0.65
A0A1W2PRF3 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.14■□□□□ 0.65
A0A1W2PRF3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
A0A1W2PRF3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
A0A1W2PRF3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
A0A1W2PRF3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
A0A1W2PRF3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
A0A1W2PRF3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
A0A1W2PRF3 BX664725.1-201ENST00000438252 379 ntBASIC19.12■□□□□ 0.65
A0A1W2PRF3 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.12■□□□□ 0.65
A0A1W2PRF3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
A0A1W2PRF3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
A0A1W2PRF3 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
A0A1W2PRF3 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
A0A1W2PRF3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
A0A1W2PRF3 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms