Protein–RNA interactions for Protein: A0A1B0GVG4

CCDC194, Coiled-coil domain-containing protein 194, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC194A0A1B0GVG4 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC194A0A1B0GVG4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
CCDC194A0A1B0GVG4 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
CCDC194A0A1B0GVG4 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
CCDC194A0A1B0GVG4 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CCDC194A0A1B0GVG4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC194A0A1B0GVG4 AC138932.3-201ENST00000567634 1902 ntBASIC26.88■■□□□ 1.89
CCDC194A0A1B0GVG4 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
CCDC194A0A1B0GVG4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC26.88■■□□□ 1.89
CCDC194A0A1B0GVG4 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC194A0A1B0GVG4 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
CCDC194A0A1B0GVG4 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC194A0A1B0GVG4 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC194A0A1B0GVG4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
CCDC194A0A1B0GVG4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC194A0A1B0GVG4 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CCDC194A0A1B0GVG4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
CCDC194A0A1B0GVG4 AC022616.5-201ENST00000518796 181 ntBASIC26.86■■□□□ 1.89
CCDC194A0A1B0GVG4 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC194A0A1B0GVG4 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC194A0A1B0GVG4 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
CCDC194A0A1B0GVG4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC26.85■■□□□ 1.89
CCDC194A0A1B0GVG4 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC26.85■■□□□ 1.89
CCDC194A0A1B0GVG4 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC194A0A1B0GVG4 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC26.84■■□□□ 1.89
CCDC194A0A1B0GVG4 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC26.84■■□□□ 1.89
CCDC194A0A1B0GVG4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CCDC194A0A1B0GVG4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC26.84■■□□□ 1.89
CCDC194A0A1B0GVG4 MIR6089-201ENST00000616698 64 ntBASIC26.84■■□□□ 1.89
CCDC194A0A1B0GVG4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.83■■□□□ 1.89
CCDC194A0A1B0GVG4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC26.83■■□□□ 1.89
CCDC194A0A1B0GVG4 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.83■■□□□ 1.89
CCDC194A0A1B0GVG4 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.83■■□□□ 1.89
CCDC194A0A1B0GVG4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
CCDC194A0A1B0GVG4 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 KRT8P33-201ENST00000508125 1423 ntBASIC26.82■■□□□ 1.88
CCDC194A0A1B0GVG4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC194A0A1B0GVG4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
CCDC194A0A1B0GVG4 SSSCA1-AS1-201ENST00000567594 614 ntBASIC26.81■■□□□ 1.88
CCDC194A0A1B0GVG4 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
CCDC194A0A1B0GVG4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 AP003733.4-201ENST00000623785 1697 ntBASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 MIR4508-201ENST00000584178 70 ntBASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC26.8■■□□□ 1.88
CCDC194A0A1B0GVG4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
CCDC194A0A1B0GVG4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC194A0A1B0GVG4 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC26.79■■□□□ 1.88
CCDC194A0A1B0GVG4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
CCDC194A0A1B0GVG4 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC26.79■■□□□ 1.88
CCDC194A0A1B0GVG4 LSR-205ENST00000427250 1606 ntTSL 2 BASIC26.79■■□□□ 1.88
CCDC194A0A1B0GVG4 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.79■■□□□ 1.88
CCDC194A0A1B0GVG4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC194A0A1B0GVG4 AC103834.1-201ENST00000520383 144 ntBASIC26.78■■□□□ 1.88
CCDC194A0A1B0GVG4 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC194A0A1B0GVG4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC26.78■■□□□ 1.88
CCDC194A0A1B0GVG4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC194A0A1B0GVG4 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
CCDC194A0A1B0GVG4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 AC090877.2-201ENST00000558441 1738 ntBASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 YBX1P4-201ENST00000392794 808 ntBASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC194A0A1B0GVG4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CCDC194A0A1B0GVG4 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.76■■□□□ 1.88
CCDC194A0A1B0GVG4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC194A0A1B0GVG4 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC194A0A1B0GVG4 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC26.76■■□□□ 1.87
CCDC194A0A1B0GVG4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC26.76■■□□□ 1.87
CCDC194A0A1B0GVG4 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC194A0A1B0GVG4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms