Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC196A0A1B0GTZ2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.38■■□□□ 1.97
CCDC196A0A1B0GTZ2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC196A0A1B0GTZ2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC196A0A1B0GTZ2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CCDC196A0A1B0GTZ2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC196A0A1B0GTZ2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC27.37■■□□□ 1.97
CCDC196A0A1B0GTZ2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC196A0A1B0GTZ2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC196A0A1B0GTZ2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC196A0A1B0GTZ2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC27.37■■□□□ 1.97
CCDC196A0A1B0GTZ2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC196A0A1B0GTZ2 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC27.36■■□□□ 1.97
CCDC196A0A1B0GTZ2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC196A0A1B0GTZ2 AC010980.1-201ENST00000587192 1142 ntBASIC27.36■■□□□ 1.97
CCDC196A0A1B0GTZ2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CCDC196A0A1B0GTZ2 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CCDC196A0A1B0GTZ2 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC196A0A1B0GTZ2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.35■■□□□ 1.97
CCDC196A0A1B0GTZ2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CCDC196A0A1B0GTZ2 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.35■■□□□ 1.97
CCDC196A0A1B0GTZ2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
CCDC196A0A1B0GTZ2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC27.34■■□□□ 1.97
CCDC196A0A1B0GTZ2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CCDC196A0A1B0GTZ2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.34■■□□□ 1.97
CCDC196A0A1B0GTZ2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.34■■□□□ 1.97
CCDC196A0A1B0GTZ2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
CCDC196A0A1B0GTZ2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC27.34■■□□□ 1.97
CCDC196A0A1B0GTZ2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC196A0A1B0GTZ2 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC196A0A1B0GTZ2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.33■■□□□ 1.97
CCDC196A0A1B0GTZ2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CCDC196A0A1B0GTZ2 PVT1_1.1-201ENST00000615125 194 ntBASIC27.33■■□□□ 1.97
CCDC196A0A1B0GTZ2 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.33■■□□□ 1.97
CCDC196A0A1B0GTZ2 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC27.33■■□□□ 1.96
CCDC196A0A1B0GTZ2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CCDC196A0A1B0GTZ2 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC196A0A1B0GTZ2 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC196A0A1B0GTZ2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC196A0A1B0GTZ2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CCDC196A0A1B0GTZ2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC196A0A1B0GTZ2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC196A0A1B0GTZ2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC196A0A1B0GTZ2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC196A0A1B0GTZ2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC27.3■■□□□ 1.96
CCDC196A0A1B0GTZ2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC27.3■■□□□ 1.96
CCDC196A0A1B0GTZ2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC196A0A1B0GTZ2 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC196A0A1B0GTZ2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.29■■□□□ 1.96
CCDC196A0A1B0GTZ2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC196A0A1B0GTZ2 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC196A0A1B0GTZ2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 AC090877.2-201ENST00000558441 1738 ntBASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
CCDC196A0A1B0GTZ2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC196A0A1B0GTZ2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC196A0A1B0GTZ2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CCDC196A0A1B0GTZ2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
CCDC196A0A1B0GTZ2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC196A0A1B0GTZ2 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC196A0A1B0GTZ2 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
CCDC196A0A1B0GTZ2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
CCDC196A0A1B0GTZ2 MIR4508-201ENST00000584178 70 ntBASIC27.26■■□□□ 1.95
CCDC196A0A1B0GTZ2 AC011551.1-201ENST00000614101 683 ntBASIC27.26■■□□□ 1.95
CCDC196A0A1B0GTZ2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC196A0A1B0GTZ2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.24■■□□□ 1.95
CCDC196A0A1B0GTZ2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC196A0A1B0GTZ2 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC196A0A1B0GTZ2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC196A0A1B0GTZ2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC196A0A1B0GTZ2 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
CCDC196A0A1B0GTZ2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC196A0A1B0GTZ2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.23■■□□□ 1.95
CCDC196A0A1B0GTZ2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC196A0A1B0GTZ2 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.23■■□□□ 1.95
CCDC196A0A1B0GTZ2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC27.22■■□□□ 1.95
CCDC196A0A1B0GTZ2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.22■■□□□ 1.95
CCDC196A0A1B0GTZ2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
CCDC196A0A1B0GTZ2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCDC196A0A1B0GTZ2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.21■■□□□ 1.95
CCDC196A0A1B0GTZ2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms