Protein–RNA interactions for Protein: A0A0C4DH67

IGKV1-8, Immunoglobulin kappa variable 1-8, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1-8A0A0C4DH67 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
IGKV1-8A0A0C4DH67 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IGKV1-8A0A0C4DH67 YBX1P4-201ENST00000392794 808 ntBASIC22.59■■□□□ 1.21
IGKV1-8A0A0C4DH67 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IGKV1-8A0A0C4DH67 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IGKV1-8A0A0C4DH67 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
IGKV1-8A0A0C4DH67 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
IGKV1-8A0A0C4DH67 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
IGKV1-8A0A0C4DH67 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
IGKV1-8A0A0C4DH67 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
IGKV1-8A0A0C4DH67 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
IGKV1-8A0A0C4DH67 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
IGKV1-8A0A0C4DH67 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC22.56■■□□□ 1.2
IGKV1-8A0A0C4DH67 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
IGKV1-8A0A0C4DH67 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.56■■□□□ 1.2
IGKV1-8A0A0C4DH67 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.56■■□□□ 1.2
IGKV1-8A0A0C4DH67 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
IGKV1-8A0A0C4DH67 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
IGKV1-8A0A0C4DH67 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.55■■□□□ 1.2
IGKV1-8A0A0C4DH67 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.55■■□□□ 1.2
IGKV1-8A0A0C4DH67 MIR6089-201ENST00000616698 64 ntBASIC22.55■■□□□ 1.2
IGKV1-8A0A0C4DH67 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
IGKV1-8A0A0C4DH67 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
IGKV1-8A0A0C4DH67 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
IGKV1-8A0A0C4DH67 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
IGKV1-8A0A0C4DH67 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
IGKV1-8A0A0C4DH67 AC120024.1-201ENST00000562672 995 ntBASIC22.54■■□□□ 1.2
IGKV1-8A0A0C4DH67 AC138932.3-201ENST00000567634 1902 ntBASIC22.54■■□□□ 1.2
IGKV1-8A0A0C4DH67 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.54■■□□□ 1.2
IGKV1-8A0A0C4DH67 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
IGKV1-8A0A0C4DH67 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
IGKV1-8A0A0C4DH67 AC142381.3-201ENST00000568208 1670 ntBASIC22.53■■□□□ 1.2
IGKV1-8A0A0C4DH67 KRT18P24-201ENST00000344739 1156 ntBASIC22.53■■□□□ 1.2
IGKV1-8A0A0C4DH67 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.53■■□□□ 1.2
IGKV1-8A0A0C4DH67 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 AC090877.2-201ENST00000558441 1738 ntBASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
IGKV1-8A0A0C4DH67 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 AC011551.1-201ENST00000614101 683 ntBASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
IGKV1-8A0A0C4DH67 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
IGKV1-8A0A0C4DH67 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC22.5■■□□□ 1.19
IGKV1-8A0A0C4DH67 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
IGKV1-8A0A0C4DH67 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
IGKV1-8A0A0C4DH67 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
IGKV1-8A0A0C4DH67 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
IGKV1-8A0A0C4DH67 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
IGKV1-8A0A0C4DH67 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
IGKV1-8A0A0C4DH67 AL031848.2-201ENST00000607670 837 ntBASIC22.49■■□□□ 1.19
IGKV1-8A0A0C4DH67 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
IGKV1-8A0A0C4DH67 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
IGKV1-8A0A0C4DH67 THA1P-201ENST00000590384 1145 ntBASIC22.48■■□□□ 1.19
IGKV1-8A0A0C4DH67 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
IGKV1-8A0A0C4DH67 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.48■■□□□ 1.19
IGKV1-8A0A0C4DH67 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 AL451085.2-201ENST00000605085 799 ntBASIC22.47■■□□□ 1.19
IGKV1-8A0A0C4DH67 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
IGKV1-8A0A0C4DH67 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.46■■□□□ 1.19
IGKV1-8A0A0C4DH67 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.46■■□□□ 1.19
IGKV1-8A0A0C4DH67 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.46■■□□□ 1.19
IGKV1-8A0A0C4DH67 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
IGKV1-8A0A0C4DH67 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
IGKV1-8A0A0C4DH67 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
IGKV1-8A0A0C4DH67 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.45■■□□□ 1.18
IGKV1-8A0A0C4DH67 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
IGKV1-8A0A0C4DH67 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.45■■□□□ 1.18
IGKV1-8A0A0C4DH67 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.45■■□□□ 1.18
IGKV1-8A0A0C4DH67 MIR4281-201ENST00000580852 62 ntBASIC22.45■■□□□ 1.18
IGKV1-8A0A0C4DH67 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.45■■□□□ 1.18
IGKV1-8A0A0C4DH67 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms