Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SPCS1Q9Y6A9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPCS1Q9Y6A9 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC20.1■□□□□ 0.81
SPCS1Q9Y6A9 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPCS1Q9Y6A9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPCS1Q9Y6A9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPCS1Q9Y6A9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC20.06■□□□□ 0.8
SPCS1Q9Y6A9 AL356512.1-201ENST00000607453 1739 ntBASIC20.05■□□□□ 0.8
SPCS1Q9Y6A9 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPCS1Q9Y6A9 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPCS1Q9Y6A9 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPCS1Q9Y6A9 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPCS1Q9Y6A9 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SPCS1Q9Y6A9 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPCS1Q9Y6A9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SPCS1Q9Y6A9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SPCS1Q9Y6A9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC20.01■□□□□ 0.79
SPCS1Q9Y6A9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SPCS1Q9Y6A9 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC19.99■□□□□ 0.79
SPCS1Q9Y6A9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPCS1Q9Y6A9 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPCS1Q9Y6A9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPCS1Q9Y6A9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPCS1Q9Y6A9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPCS1Q9Y6A9 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.95■□□□□ 0.78
SPCS1Q9Y6A9 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPCS1Q9Y6A9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SPCS1Q9Y6A9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC19.94■□□□□ 0.78
SPCS1Q9Y6A9 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPCS1Q9Y6A9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPCS1Q9Y6A9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPCS1Q9Y6A9 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC19.92■□□□□ 0.78
SPCS1Q9Y6A9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SPCS1Q9Y6A9 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
SPCS1Q9Y6A9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
SPCS1Q9Y6A9 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SPCS1Q9Y6A9 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
SPCS1Q9Y6A9 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPCS1Q9Y6A9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC19.88■□□□□ 0.77
SPCS1Q9Y6A9 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC19.86■□□□□ 0.77
SPCS1Q9Y6A9 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SPCS1Q9Y6A9 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SPCS1Q9Y6A9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SPCS1Q9Y6A9 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SPCS1Q9Y6A9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SPCS1Q9Y6A9 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SPCS1Q9Y6A9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
SPCS1Q9Y6A9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPCS1Q9Y6A9 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SPCS1Q9Y6A9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SPCS1Q9Y6A9 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SPCS1Q9Y6A9 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPCS1Q9Y6A9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPCS1Q9Y6A9 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SPCS1Q9Y6A9 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SPCS1Q9Y6A9 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SPCS1Q9Y6A9 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPCS1Q9Y6A9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPCS1Q9Y6A9 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SPCS1Q9Y6A9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS1Q9Y6A9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS1Q9Y6A9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS1Q9Y6A9 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS1Q9Y6A9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPCS1Q9Y6A9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SPCS1Q9Y6A9 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SPCS1Q9Y6A9 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SPCS1Q9Y6A9 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SPCS1Q9Y6A9 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SPCS1Q9Y6A9 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SPCS1Q9Y6A9 AC135731.1-201ENST00000569415 2548 ntBASIC19.61■□□□□ 0.73
SPCS1Q9Y6A9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SPCS1Q9Y6A9 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SPCS1Q9Y6A9 SHF-206ENST00000560471 2499 ntTSL 5 BASIC19.59■□□□□ 0.73
SPCS1Q9Y6A9 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPCS1Q9Y6A9 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SPCS1Q9Y6A9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SPCS1Q9Y6A9 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SPCS1Q9Y6A9 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPCS1Q9Y6A9 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SPCS1Q9Y6A9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SPCS1Q9Y6A9 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SPCS1Q9Y6A9 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SPCS1Q9Y6A9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SPCS1Q9Y6A9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPCS1Q9Y6A9 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC19.51■□□□□ 0.71
SPCS1Q9Y6A9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SPCS1Q9Y6A9 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SPCS1Q9Y6A9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPCS1Q9Y6A9 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SPCS1Q9Y6A9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SPCS1Q9Y6A9 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPCS1Q9Y6A9 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPCS1Q9Y6A9 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SPCS1Q9Y6A9 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SPCS1Q9Y6A9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SPCS1Q9Y6A9 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SPCS1Q9Y6A9 ABCB10P3-201ENST00000561950 2166 ntBASIC19.46■□□□□ 0.71
SPCS1Q9Y6A9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SPCS1Q9Y6A9 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms