Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC31.13■■■□□ 2.57
HCFC2Q9Y5Z7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
HCFC2Q9Y5Z7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC31.12■■■□□ 2.57
HCFC2Q9Y5Z7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
HCFC2Q9Y5Z7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.1■■■□□ 2.57
HCFC2Q9Y5Z7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
HCFC2Q9Y5Z7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
HCFC2Q9Y5Z7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.09■■■□□ 2.57
HCFC2Q9Y5Z7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
HCFC2Q9Y5Z7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.03■■■□□ 2.56
HCFC2Q9Y5Z7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.02■■■□□ 2.56
HCFC2Q9Y5Z7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HCFC2Q9Y5Z7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.99■■■□□ 2.55
HCFC2Q9Y5Z7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
HCFC2Q9Y5Z7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.97■■■□□ 2.55
HCFC2Q9Y5Z7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC30.95■■■□□ 2.55
HCFC2Q9Y5Z7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC30.95■■■□□ 2.55
HCFC2Q9Y5Z7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
HCFC2Q9Y5Z7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC30.89■■■□□ 2.54
HCFC2Q9Y5Z7 RARRES2P7-201ENST00000567349 469 ntBASIC30.89■■■□□ 2.54
HCFC2Q9Y5Z7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.88■■■□□ 2.53
HCFC2Q9Y5Z7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
HCFC2Q9Y5Z7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC30.83■■■□□ 2.53
HCFC2Q9Y5Z7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.79■■■□□ 2.52
HCFC2Q9Y5Z7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
HCFC2Q9Y5Z7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.73■■■□□ 2.51
HCFC2Q9Y5Z7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.73■■■□□ 2.51
HCFC2Q9Y5Z7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.69■■■□□ 2.5
HCFC2Q9Y5Z7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
HCFC2Q9Y5Z7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.68■■■□□ 2.5
HCFC2Q9Y5Z7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.66■■■□□ 2.5
HCFC2Q9Y5Z7 AC097358.2-201ENST00000607541 1159 ntBASIC30.66■■■□□ 2.5
HCFC2Q9Y5Z7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.64■■■□□ 2.5
HCFC2Q9Y5Z7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC30.64■■■□□ 2.5
HCFC2Q9Y5Z7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
HCFC2Q9Y5Z7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
HCFC2Q9Y5Z7 AC136428.2-201ENST00000563187 214 ntBASIC30.59■■■□□ 2.49
HCFC2Q9Y5Z7 SETD8P1-201ENST00000623146 1180 ntBASIC30.59■■■□□ 2.49
HCFC2Q9Y5Z7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.57■■■□□ 2.48
HCFC2Q9Y5Z7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
HCFC2Q9Y5Z7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.55■■■□□ 2.48
HCFC2Q9Y5Z7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
HCFC2Q9Y5Z7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC30.52■■■□□ 2.48
HCFC2Q9Y5Z7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC30.51■■■□□ 2.47
HCFC2Q9Y5Z7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.47
HCFC2Q9Y5Z7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
HCFC2Q9Y5Z7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
HCFC2Q9Y5Z7 SUZ12P1-203ENST00000578195 985 ntBASIC30.46■■■□□ 2.47
HCFC2Q9Y5Z7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC30.44■■■□□ 2.46
HCFC2Q9Y5Z7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
HCFC2Q9Y5Z7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC30.4■■■□□ 2.46
HCFC2Q9Y5Z7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HCFC2Q9Y5Z7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
HCFC2Q9Y5Z7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.39■■■□□ 2.46
HCFC2Q9Y5Z7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC30.36■■■□□ 2.45
HCFC2Q9Y5Z7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
HCFC2Q9Y5Z7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
HCFC2Q9Y5Z7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.34■■■□□ 2.45
HCFC2Q9Y5Z7 RPS2P35-201ENST00000443417 897 ntBASIC30.32■■■□□ 2.44
HCFC2Q9Y5Z7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
HCFC2Q9Y5Z7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC30.3■■■□□ 2.44
HCFC2Q9Y5Z7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC30.28■■■□□ 2.44
HCFC2Q9Y5Z7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
HCFC2Q9Y5Z7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HCFC2Q9Y5Z7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC30.26■■■□□ 2.43
HCFC2Q9Y5Z7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
HCFC2Q9Y5Z7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC30.24■■■□□ 2.43
HCFC2Q9Y5Z7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
HCFC2Q9Y5Z7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
HCFC2Q9Y5Z7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
HCFC2Q9Y5Z7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.2■■■□□ 2.43
HCFC2Q9Y5Z7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.17■■■□□ 2.42
HCFC2Q9Y5Z7 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.15■■■□□ 2.42
HCFC2Q9Y5Z7 AC145285.7-201ENST00000614819 1539 ntBASIC30.15■■■□□ 2.42
HCFC2Q9Y5Z7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
HCFC2Q9Y5Z7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC30.11■■■□□ 2.41
HCFC2Q9Y5Z7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.09■■■□□ 2.41
HCFC2Q9Y5Z7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
HCFC2Q9Y5Z7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
HCFC2Q9Y5Z7 CAHM-201ENST00000604200 896 ntBASIC30.06■■■□□ 2.4
HCFC2Q9Y5Z7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
HCFC2Q9Y5Z7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
HCFC2Q9Y5Z7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC29.99■■■□□ 2.39
HCFC2Q9Y5Z7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
HCFC2Q9Y5Z7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
HCFC2Q9Y5Z7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.38
HCFC2Q9Y5Z7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
HCFC2Q9Y5Z7 AL162393.1-201ENST00000437852 946 ntBASIC29.94■■■□□ 2.38
HCFC2Q9Y5Z7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
HCFC2Q9Y5Z7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC29.93■■■□□ 2.38
HCFC2Q9Y5Z7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
HCFC2Q9Y5Z7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
HCFC2Q9Y5Z7 AL391121.1-201ENST00000607967 1349 ntBASIC29.92■■■□□ 2.38
HCFC2Q9Y5Z7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
HCFC2Q9Y5Z7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC29.9■■■□□ 2.38
HCFC2Q9Y5Z7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC29.89■■■□□ 2.38
HCFC2Q9Y5Z7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC29.89■■■□□ 2.38
HCFC2Q9Y5Z7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
HCFC2Q9Y5Z7 AL133380.1-201ENST00000506013 324 ntBASIC29.87■■■□□ 2.37
HCFC2Q9Y5Z7 AP006261.1-201ENST00000584783 668 ntBASIC29.87■■■□□ 2.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms