Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PUF60Q9UHX1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PUF60Q9UHX1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
PUF60Q9UHX1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PUF60Q9UHX1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
PUF60Q9UHX1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
PUF60Q9UHX1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PUF60Q9UHX1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.84■■■□□ 2.69
PUF60Q9UHX1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.83■■■□□ 2.69
PUF60Q9UHX1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
PUF60Q9UHX1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.76■■■□□ 2.67
PUF60Q9UHX1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.76■■■□□ 2.67
PUF60Q9UHX1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PUF60Q9UHX1 DYNLL1-208ENST00000550178 581 ntBASIC31.75■■■□□ 2.67
PUF60Q9UHX1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PUF60Q9UHX1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PUF60Q9UHX1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PUF60Q9UHX1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PUF60Q9UHX1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.62■■■□□ 2.65
PUF60Q9UHX1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PUF60Q9UHX1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.61■■■□□ 2.65
PUF60Q9UHX1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
PUF60Q9UHX1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PUF60Q9UHX1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.6■■■□□ 2.65
PUF60Q9UHX1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PUF60Q9UHX1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PUF60Q9UHX1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PUF60Q9UHX1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.52■■■□□ 2.64
PUF60Q9UHX1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PUF60Q9UHX1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PUF60Q9UHX1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
PUF60Q9UHX1 AL031258.1-201ENST00000623562 325 ntBASIC31.5■■■□□ 2.63
PUF60Q9UHX1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
PUF60Q9UHX1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PUF60Q9UHX1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PUF60Q9UHX1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
PUF60Q9UHX1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
PUF60Q9UHX1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PUF60Q9UHX1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
PUF60Q9UHX1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PUF60Q9UHX1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.61
PUF60Q9UHX1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PUF60Q9UHX1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PUF60Q9UHX1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
PUF60Q9UHX1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.34■■■□□ 2.61
PUF60Q9UHX1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.34■■■□□ 2.61
PUF60Q9UHX1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.33■■■□□ 2.61
PUF60Q9UHX1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PUF60Q9UHX1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PUF60Q9UHX1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.3■■■□□ 2.6
PUF60Q9UHX1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PUF60Q9UHX1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PUF60Q9UHX1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.29■■■□□ 2.6
PUF60Q9UHX1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.29■■■□□ 2.6
PUF60Q9UHX1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
PUF60Q9UHX1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PUF60Q9UHX1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PUF60Q9UHX1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
PUF60Q9UHX1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PUF60Q9UHX1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.18■■■□□ 2.58
PUF60Q9UHX1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PUF60Q9UHX1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.17■■■□□ 2.58
PUF60Q9UHX1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.14■■■□□ 2.58
PUF60Q9UHX1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
PUF60Q9UHX1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
PUF60Q9UHX1 RARRES2P7-201ENST00000567349 469 ntBASIC31.13■■■□□ 2.57
PUF60Q9UHX1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
PUF60Q9UHX1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
PUF60Q9UHX1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PUF60Q9UHX1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PUF60Q9UHX1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.09■■■□□ 2.57
PUF60Q9UHX1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PUF60Q9UHX1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.08■■■□□ 2.57
PUF60Q9UHX1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.08■■■□□ 2.57
PUF60Q9UHX1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.07■■■□□ 2.56
PUF60Q9UHX1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.06■■■□□ 2.56
PUF60Q9UHX1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.06■■■□□ 2.56
PUF60Q9UHX1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
PUF60Q9UHX1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.01■■■□□ 2.55
PUF60Q9UHX1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.01■■■□□ 2.55
PUF60Q9UHX1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31■■■□□ 2.55
PUF60Q9UHX1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31■■■□□ 2.55
PUF60Q9UHX1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PUF60Q9UHX1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.98■■■□□ 2.55
PUF60Q9UHX1 AC145285.7-201ENST00000614819 1539 ntBASIC30.97■■■□□ 2.55
PUF60Q9UHX1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PUF60Q9UHX1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PUF60Q9UHX1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
PUF60Q9UHX1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
PUF60Q9UHX1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.94■■■□□ 2.54
PUF60Q9UHX1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
PUF60Q9UHX1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.9■■■□□ 2.54
PUF60Q9UHX1 AC097358.2-201ENST00000607541 1159 ntBASIC30.88■■■□□ 2.53
PUF60Q9UHX1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PUF60Q9UHX1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.86■■■□□ 2.53
PUF60Q9UHX1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms