Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
PUF60Q9UHX1 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
PUF60Q9UHX1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
PUF60Q9UHX1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
PUF60Q9UHX1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
PUF60Q9UHX1 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
PUF60Q9UHX1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
PUF60Q9UHX1 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.84■■■□□ 2.69
PUF60Q9UHX1 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.83■■■□□ 2.69
PUF60Q9UHX1 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
PUF60Q9UHX1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.76■■■□□ 2.67
PUF60Q9UHX1 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.76■■■□□ 2.67
PUF60Q9UHX1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PUF60Q9UHX1 DYNLL1-208ENST00000550178 581 ntBASIC31.75■■■□□ 2.67
PUF60Q9UHX1 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PUF60Q9UHX1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
PUF60Q9UHX1 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
PUF60Q9UHX1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
PUF60Q9UHX1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.62■■■□□ 2.65
PUF60Q9UHX1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
PUF60Q9UHX1 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.61■■■□□ 2.65
PUF60Q9UHX1 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
PUF60Q9UHX1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
PUF60Q9UHX1 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.6■■■□□ 2.65
PUF60Q9UHX1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
PUF60Q9UHX1 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
PUF60Q9UHX1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PUF60Q9UHX1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.52■■■□□ 2.64
PUF60Q9UHX1 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
PUF60Q9UHX1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
PUF60Q9UHX1 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.5■■■□□ 2.63
PUF60Q9UHX1 AL031258.1-201ENST00000623562 325 ntBASIC31.5■■■□□ 2.63
PUF60Q9UHX1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
PUF60Q9UHX1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
PUF60Q9UHX1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
PUF60Q9UHX1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.47■■■□□ 2.63
PUF60Q9UHX1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
PUF60Q9UHX1 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
PUF60Q9UHX1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
PUF60Q9UHX1 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PUF60Q9UHX1 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.61
PUF60Q9UHX1 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
PUF60Q9UHX1 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PUF60Q9UHX1 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.35■■■□□ 2.61
PUF60Q9UHX1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.34■■■□□ 2.61
PUF60Q9UHX1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.34■■■□□ 2.61
PUF60Q9UHX1 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.33■■■□□ 2.61
PUF60Q9UHX1 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
PUF60Q9UHX1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PUF60Q9UHX1 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.3■■■□□ 2.6
PUF60Q9UHX1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
PUF60Q9UHX1 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PUF60Q9UHX1 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.29■■■□□ 2.6
PUF60Q9UHX1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.29■■■□□ 2.6
PUF60Q9UHX1 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC31.27■■■□□ 2.6
PUF60Q9UHX1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PUF60Q9UHX1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PUF60Q9UHX1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
PUF60Q9UHX1 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
PUF60Q9UHX1 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 ST7-205ENST00000393446 2114 ntTSL 5 BASIC31.19■■■□□ 2.58
PUF60Q9UHX1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.18■■■□□ 2.58
PUF60Q9UHX1 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.17■■■□□ 2.58
PUF60Q9UHX1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.17■■■□□ 2.58
PUF60Q9UHX1 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.14■■■□□ 2.58
PUF60Q9UHX1 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.57
PUF60Q9UHX1 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC31.14■■■□□ 2.57
PUF60Q9UHX1 RARRES2P7-201ENST00000567349 469 ntBASIC31.13■■■□□ 2.57
PUF60Q9UHX1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.12■■■□□ 2.57
PUF60Q9UHX1 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
PUF60Q9UHX1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
PUF60Q9UHX1 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
PUF60Q9UHX1 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.09■■■□□ 2.57
PUF60Q9UHX1 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
PUF60Q9UHX1 ST7-202ENST00000323984 2142 ntTSL 5 BASIC31.08■■■□□ 2.57
PUF60Q9UHX1 ST7-207ENST00000393449 2127 ntTSL 5 BASIC31.08■■■□□ 2.57
PUF60Q9UHX1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.07■■■□□ 2.56
PUF60Q9UHX1 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.06■■■□□ 2.56
PUF60Q9UHX1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.06■■■□□ 2.56
PUF60Q9UHX1 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
PUF60Q9UHX1 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.01■■■□□ 2.55
PUF60Q9UHX1 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.01■■■□□ 2.55
PUF60Q9UHX1 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31■■■□□ 2.55
PUF60Q9UHX1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31■■■□□ 2.55
PUF60Q9UHX1 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
PUF60Q9UHX1 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.98■■■□□ 2.55
PUF60Q9UHX1 AC145285.7-201ENST00000614819 1539 ntBASIC30.97■■■□□ 2.55
PUF60Q9UHX1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PUF60Q9UHX1 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.96■■■□□ 2.55
PUF60Q9UHX1 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
PUF60Q9UHX1 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
PUF60Q9UHX1 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC30.94■■■□□ 2.54
PUF60Q9UHX1 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.92■■■□□ 2.54
PUF60Q9UHX1 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC30.9■■■□□ 2.54
PUF60Q9UHX1 AC097358.2-201ENST00000607541 1159 ntBASIC30.88■■■□□ 2.53
PUF60Q9UHX1 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
PUF60Q9UHX1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC30.86■■■□□ 2.53
PUF60Q9UHX1 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms