Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
RNF216Q9NWF9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
RNF216Q9NWF9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.06■■■□□ 2.72
RNF216Q9NWF9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
RNF216Q9NWF9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
RNF216Q9NWF9 DYNLL1-208ENST00000550178 581 ntBASIC32.03■■■□□ 2.72
RNF216Q9NWF9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
RNF216Q9NWF9 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.02■■■□□ 2.72
RNF216Q9NWF9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
RNF216Q9NWF9 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
RNF216Q9NWF9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
RNF216Q9NWF9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.94■■■□□ 2.7
RNF216Q9NWF9 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
RNF216Q9NWF9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
RNF216Q9NWF9 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
RNF216Q9NWF9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.92■■■□□ 2.7
RNF216Q9NWF9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
RNF216Q9NWF9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC31.86■■■□□ 2.69
RNF216Q9NWF9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
RNF216Q9NWF9 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
RNF216Q9NWF9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
RNF216Q9NWF9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
RNF216Q9NWF9 AL031258.1-201ENST00000623562 325 ntBASIC31.79■■■□□ 2.68
RNF216Q9NWF9 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
RNF216Q9NWF9 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
RNF216Q9NWF9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
RNF216Q9NWF9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RNF216Q9NWF9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC31.74■■■□□ 2.67
RNF216Q9NWF9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC31.72■■■□□ 2.67
RNF216Q9NWF9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
RNF216Q9NWF9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC31.66■■■□□ 2.66
RNF216Q9NWF9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.65■■■□□ 2.66
RNF216Q9NWF9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC31.63■■■□□ 2.65
RNF216Q9NWF9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC31.63■■■□□ 2.65
RNF216Q9NWF9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RNF216Q9NWF9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
RNF216Q9NWF9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
RNF216Q9NWF9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.58■■■□□ 2.65
RNF216Q9NWF9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
RNF216Q9NWF9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.5■■■□□ 2.63
RNF216Q9NWF9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.49■■■□□ 2.63
RNF216Q9NWF9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
RNF216Q9NWF9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RNF216Q9NWF9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.45■■■□□ 2.63
RNF216Q9NWF9 RARRES2P7-201ENST00000567349 469 ntBASIC31.42■■■□□ 2.62
RNF216Q9NWF9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
RNF216Q9NWF9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.38■■■□□ 2.61
RNF216Q9NWF9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
RNF216Q9NWF9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC31.37■■■□□ 2.61
RNF216Q9NWF9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.36■■■□□ 2.61
RNF216Q9NWF9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
RNF216Q9NWF9 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
RNF216Q9NWF9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC31.31■■■□□ 2.6
RNF216Q9NWF9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
RNF216Q9NWF9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.28■■■□□ 2.6
RNF216Q9NWF9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.28■■■□□ 2.6
RNF216Q9NWF9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.27■■■□□ 2.6
RNF216Q9NWF9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.26■■■□□ 2.59
RNF216Q9NWF9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.25■■■□□ 2.59
RNF216Q9NWF9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
RNF216Q9NWF9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.23■■■□□ 2.59
RNF216Q9NWF9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.23■■■□□ 2.59
RNF216Q9NWF9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
RNF216Q9NWF9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.22■■■□□ 2.59
RNF216Q9NWF9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.22■■■□□ 2.59
RNF216Q9NWF9 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
RNF216Q9NWF9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.2■■■□□ 2.59
RNF216Q9NWF9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
RNF216Q9NWF9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RNF216Q9NWF9 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
RNF216Q9NWF9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.15■■■□□ 2.58
RNF216Q9NWF9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.15■■■□□ 2.58
RNF216Q9NWF9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
RNF216Q9NWF9 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
RNF216Q9NWF9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RNF216Q9NWF9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
RNF216Q9NWF9 AC097358.2-201ENST00000607541 1159 ntBASIC31.1■■■□□ 2.57
RNF216Q9NWF9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.09■■■□□ 2.57
RNF216Q9NWF9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.09■■■□□ 2.57
RNF216Q9NWF9 SETD8P1-201ENST00000623146 1180 ntBASIC31.08■■■□□ 2.57
RNF216Q9NWF9 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.07■■■□□ 2.56
RNF216Q9NWF9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RNF216Q9NWF9 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.06■■■□□ 2.56
RNF216Q9NWF9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
RNF216Q9NWF9 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
RNF216Q9NWF9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
RNF216Q9NWF9 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
RNF216Q9NWF9 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
RNF216Q9NWF9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.03■■■□□ 2.56
RNF216Q9NWF9 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.03■■■□□ 2.56
RNF216Q9NWF9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
RNF216Q9NWF9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
RNF216Q9NWF9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC30.99■■■□□ 2.55
RNF216Q9NWF9 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
RNF216Q9NWF9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC30.97■■■□□ 2.55
RNF216Q9NWF9 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
RNF216Q9NWF9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.54
RNF216Q9NWF9 AC136428.2-201ENST00000563187 214 ntBASIC30.93■■■□□ 2.54
RNF216Q9NWF9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
RNF216Q9NWF9 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.92■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms