Protein–RNA interactions for Protein: Q9H4L7

SMARCAD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, humanhuman

Predictions only

Length 1,026 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1Q9H4L7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
SMARCAD1Q9H4L7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SMARCAD1Q9H4L7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
SMARCAD1Q9H4L7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
SMARCAD1Q9H4L7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.51■■■□□ 2.8
SMARCAD1Q9H4L7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SMARCAD1Q9H4L7 AL031258.1-201ENST00000623562 325 ntBASIC32.47■■■□□ 2.79
SMARCAD1Q9H4L7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.43■■■□□ 2.78
SMARCAD1Q9H4L7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.43■■■□□ 2.78
SMARCAD1Q9H4L7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SMARCAD1Q9H4L7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.37■■■□□ 2.77
SMARCAD1Q9H4L7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
SMARCAD1Q9H4L7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SMARCAD1Q9H4L7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC32.32■■■□□ 2.76
SMARCAD1Q9H4L7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC32.31■■■□□ 2.76
SMARCAD1Q9H4L7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.28■■■□□ 2.76
SMARCAD1Q9H4L7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.28■■■□□ 2.76
SMARCAD1Q9H4L7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SMARCAD1Q9H4L7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.2■■■□□ 2.75
SMARCAD1Q9H4L7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.2■■■□□ 2.75
SMARCAD1Q9H4L7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
SMARCAD1Q9H4L7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SMARCAD1Q9H4L7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
SMARCAD1Q9H4L7 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
SMARCAD1Q9H4L7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SMARCAD1Q9H4L7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC32.12■■■□□ 2.73
SMARCAD1Q9H4L7 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.12■■■□□ 2.73
SMARCAD1Q9H4L7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC32.09■■■□□ 2.73
SMARCAD1Q9H4L7 AC145285.7-201ENST00000614819 1539 ntBASIC32.09■■■□□ 2.73
SMARCAD1Q9H4L7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
SMARCAD1Q9H4L7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC32.06■■■□□ 2.72
SMARCAD1Q9H4L7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC32.04■■■□□ 2.72
SMARCAD1Q9H4L7 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.03■■■□□ 2.72
SMARCAD1Q9H4L7 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC32.01■■■□□ 2.71
SMARCAD1Q9H4L7 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
SMARCAD1Q9H4L7 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCAD1Q9H4L7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
SMARCAD1Q9H4L7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.98■■■□□ 2.71
SMARCAD1Q9H4L7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.97■■■□□ 2.71
SMARCAD1Q9H4L7 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
SMARCAD1Q9H4L7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.89■■■□□ 2.7
SMARCAD1Q9H4L7 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
SMARCAD1Q9H4L7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.88■■■□□ 2.69
SMARCAD1Q9H4L7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
SMARCAD1Q9H4L7 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.85■■■□□ 2.69
SMARCAD1Q9H4L7 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.85■■■□□ 2.69
SMARCAD1Q9H4L7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
SMARCAD1Q9H4L7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCAD1Q9H4L7 RARRES2P7-201ENST00000567349 469 ntBASIC31.84■■■□□ 2.69
SMARCAD1Q9H4L7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
SMARCAD1Q9H4L7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.82■■■□□ 2.68
SMARCAD1Q9H4L7 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.8■■■□□ 2.68
SMARCAD1Q9H4L7 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SMARCAD1Q9H4L7 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCAD1Q9H4L7 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SMARCAD1Q9H4L7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.76■■■□□ 2.67
SMARCAD1Q9H4L7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.71■■■□□ 2.67
SMARCAD1Q9H4L7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
SMARCAD1Q9H4L7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.7■■■□□ 2.67
SMARCAD1Q9H4L7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.69■■■□□ 2.66
SMARCAD1Q9H4L7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
SMARCAD1Q9H4L7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.68■■■□□ 2.66
SMARCAD1Q9H4L7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.67■■■□□ 2.66
SMARCAD1Q9H4L7 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
SMARCAD1Q9H4L7 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCAD1Q9H4L7 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
SMARCAD1Q9H4L7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.65■■■□□ 2.66
SMARCAD1Q9H4L7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.65■■■□□ 2.66
SMARCAD1Q9H4L7 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
SMARCAD1Q9H4L7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.61■■■□□ 2.65
SMARCAD1Q9H4L7 SETD8P1-201ENST00000623146 1180 ntBASIC31.59■■■□□ 2.65
SMARCAD1Q9H4L7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.57■■■□□ 2.64
SMARCAD1Q9H4L7 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
SMARCAD1Q9H4L7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
SMARCAD1Q9H4L7 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.56■■■□□ 2.64
SMARCAD1Q9H4L7 AC097358.2-201ENST00000607541 1159 ntBASIC31.55■■■□□ 2.64
SMARCAD1Q9H4L7 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
SMARCAD1Q9H4L7 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
SMARCAD1Q9H4L7 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
SMARCAD1Q9H4L7 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
SMARCAD1Q9H4L7 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.49■■■□□ 2.63
SMARCAD1Q9H4L7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCAD1Q9H4L7 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCAD1Q9H4L7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
SMARCAD1Q9H4L7 AC136428.2-201ENST00000563187 214 ntBASIC31.47■■■□□ 2.63
SMARCAD1Q9H4L7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.47■■■□□ 2.63
SMARCAD1Q9H4L7 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
SMARCAD1Q9H4L7 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
SMARCAD1Q9H4L7 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.44■■■□□ 2.62
SMARCAD1Q9H4L7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.43■■■□□ 2.62
SMARCAD1Q9H4L7 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC31.34■■■□□ 2.61
SMARCAD1Q9H4L7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCAD1Q9H4L7 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCAD1Q9H4L7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
SMARCAD1Q9H4L7 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC31.32■■■□□ 2.6
SMARCAD1Q9H4L7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.32■■■□□ 2.6
SMARCAD1Q9H4L7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.32■■■□□ 2.6
SMARCAD1Q9H4L7 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC31.31■■■□□ 2.6
SMARCAD1Q9H4L7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.31■■■□□ 2.6
SMARCAD1Q9H4L7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms