Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ATXN3LQ9H3M9 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
ATXN3LQ9H3M9 ILK-212ENST00000532063 1617 ntTSL 2 BASIC30.6■■■□□ 2.49
ATXN3LQ9H3M9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ATXN3LQ9H3M9 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC30.57■■■□□ 2.49
ATXN3LQ9H3M9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.57■■■□□ 2.48
ATXN3LQ9H3M9 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
ATXN3LQ9H3M9 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC30.56■■■□□ 2.48
ATXN3LQ9H3M9 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC30.54■■■□□ 2.48
ATXN3LQ9H3M9 AL031258.1-201ENST00000623562 325 ntBASIC30.52■■■□□ 2.48
ATXN3LQ9H3M9 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
ATXN3LQ9H3M9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.44■■■□□ 2.46
ATXN3LQ9H3M9 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.44■■■□□ 2.46
ATXN3LQ9H3M9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
ATXN3LQ9H3M9 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
ATXN3LQ9H3M9 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.4■■■□□ 2.46
ATXN3LQ9H3M9 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATXN3LQ9H3M9 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
ATXN3LQ9H3M9 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.32■■■□□ 2.44
ATXN3LQ9H3M9 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.32■■■□□ 2.44
ATXN3LQ9H3M9 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
ATXN3LQ9H3M9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.25■■■□□ 2.43
ATXN3LQ9H3M9 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.24■■■□□ 2.43
ATXN3LQ9H3M9 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
ATXN3LQ9H3M9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.24■■■□□ 2.43
ATXN3LQ9H3M9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.21■■■□□ 2.43
ATXN3LQ9H3M9 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
ATXN3LQ9H3M9 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
ATXN3LQ9H3M9 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.17■■■□□ 2.42
ATXN3LQ9H3M9 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ATXN3LQ9H3M9 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.16■■■□□ 2.42
ATXN3LQ9H3M9 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.14■■■□□ 2.42
ATXN3LQ9H3M9 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ATXN3LQ9H3M9 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ATXN3LQ9H3M9 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.08■■■□□ 2.41
ATXN3LQ9H3M9 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
ATXN3LQ9H3M9 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.07■■■□□ 2.4
ATXN3LQ9H3M9 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.06■■■□□ 2.4
ATXN3LQ9H3M9 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.06■■■□□ 2.4
ATXN3LQ9H3M9 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
ATXN3LQ9H3M9 RARRES2P7-201ENST00000567349 469 ntBASIC30.02■■■□□ 2.4
ATXN3LQ9H3M9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ATXN3LQ9H3M9 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
ATXN3LQ9H3M9 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC29.97■■■□□ 2.39
ATXN3LQ9H3M9 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
ATXN3LQ9H3M9 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
ATXN3LQ9H3M9 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
ATXN3LQ9H3M9 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC29.93■■■□□ 2.38
ATXN3LQ9H3M9 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.93■■■□□ 2.38
ATXN3LQ9H3M9 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.92■■■□□ 2.38
ATXN3LQ9H3M9 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
ATXN3LQ9H3M9 AC145285.7-201ENST00000614819 1539 ntBASIC29.9■■■□□ 2.38
ATXN3LQ9H3M9 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
ATXN3LQ9H3M9 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.89■■■□□ 2.38
ATXN3LQ9H3M9 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.89■■■□□ 2.38
ATXN3LQ9H3M9 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC29.88■■■□□ 2.37
ATXN3LQ9H3M9 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC29.85■■■□□ 2.37
ATXN3LQ9H3M9 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
ATXN3LQ9H3M9 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC29.83■■■□□ 2.37
ATXN3LQ9H3M9 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.83■■■□□ 2.37
ATXN3LQ9H3M9 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.82■■■□□ 2.36
ATXN3LQ9H3M9 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.81■■■□□ 2.36
ATXN3LQ9H3M9 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.81■■■□□ 2.36
ATXN3LQ9H3M9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC29.81■■■□□ 2.36
ATXN3LQ9H3M9 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
ATXN3LQ9H3M9 MVK-208ENST00000539696 608 ntTSL 5 BASIC29.76■■■□□ 2.35
ATXN3LQ9H3M9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.76■■■□□ 2.35
ATXN3LQ9H3M9 SETD8P1-201ENST00000623146 1180 ntBASIC29.76■■■□□ 2.35
ATXN3LQ9H3M9 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
ATXN3LQ9H3M9 AC097358.2-201ENST00000607541 1159 ntBASIC29.75■■■□□ 2.35
ATXN3LQ9H3M9 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
ATXN3LQ9H3M9 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
ATXN3LQ9H3M9 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.73■■■□□ 2.35
ATXN3LQ9H3M9 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.71■■■□□ 2.35
ATXN3LQ9H3M9 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
ATXN3LQ9H3M9 AC136428.2-201ENST00000563187 214 ntBASIC29.64■■■□□ 2.34
ATXN3LQ9H3M9 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ATXN3LQ9H3M9 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
ATXN3LQ9H3M9 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
ATXN3LQ9H3M9 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
ATXN3LQ9H3M9 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
ATXN3LQ9H3M9 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.59■■■□□ 2.33
ATXN3LQ9H3M9 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC29.55■■■□□ 2.32
ATXN3LQ9H3M9 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
ATXN3LQ9H3M9 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
ATXN3LQ9H3M9 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC29.52■■■□□ 2.32
ATXN3LQ9H3M9 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.32
ATXN3LQ9H3M9 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
ATXN3LQ9H3M9 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC29.5■■■□□ 2.31
ATXN3LQ9H3M9 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC29.5■■■□□ 2.31
ATXN3LQ9H3M9 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC29.5■■■□□ 2.31
ATXN3LQ9H3M9 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
ATXN3LQ9H3M9 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
ATXN3LQ9H3M9 SUZ12P1-203ENST00000578195 985 ntBASIC29.44■■■□□ 2.3
ATXN3LQ9H3M9 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC29.43■■■□□ 2.3
ATXN3LQ9H3M9 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.41■■■□□ 2.3
ATXN3LQ9H3M9 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC29.4■■■□□ 2.3
ATXN3LQ9H3M9 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
ATXN3LQ9H3M9 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
ATXN3LQ9H3M9 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms