Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SNX25Q9H3E2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
SNX25Q9H3E2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.84■■■□□ 2.53
SNX25Q9H3E2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.84■■■□□ 2.53
SNX25Q9H3E2 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
SNX25Q9H3E2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SNX25Q9H3E2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.83■■■□□ 2.53
SNX25Q9H3E2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
SNX25Q9H3E2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.82■■■□□ 2.52
SNX25Q9H3E2 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SNX25Q9H3E2 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC30.81■■■□□ 2.52
SNX25Q9H3E2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SNX25Q9H3E2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
SNX25Q9H3E2 DYNLL1-208ENST00000550178 581 ntBASIC30.77■■■□□ 2.52
SNX25Q9H3E2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC30.73■■■□□ 2.51
SNX25Q9H3E2 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
SNX25Q9H3E2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.72■■■□□ 2.51
SNX25Q9H3E2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC30.71■■■□□ 2.51
SNX25Q9H3E2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SNX25Q9H3E2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.7■■■□□ 2.51
SNX25Q9H3E2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
SNX25Q9H3E2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.69■■■□□ 2.5
SNX25Q9H3E2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
SNX25Q9H3E2 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.65■■■□□ 2.5
SNX25Q9H3E2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SNX25Q9H3E2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC30.64■■■□□ 2.5
SNX25Q9H3E2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SNX25Q9H3E2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
SNX25Q9H3E2 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
SNX25Q9H3E2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.61■■■□□ 2.49
SNX25Q9H3E2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC30.61■■■□□ 2.49
SNX25Q9H3E2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC30.59■■■□□ 2.49
SNX25Q9H3E2 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
SNX25Q9H3E2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
SNX25Q9H3E2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.55■■■□□ 2.48
SNX25Q9H3E2 AL031258.1-201ENST00000623562 325 ntBASIC30.54■■■□□ 2.48
SNX25Q9H3E2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
SNX25Q9H3E2 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SNX25Q9H3E2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC30.46■■■□□ 2.47
SNX25Q9H3E2 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC30.45■■■□□ 2.47
SNX25Q9H3E2 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC30.43■■■□□ 2.46
SNX25Q9H3E2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
SNX25Q9H3E2 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SNX25Q9H3E2 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
SNX25Q9H3E2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SNX25Q9H3E2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC30.38■■■□□ 2.45
SNX25Q9H3E2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC30.37■■■□□ 2.45
SNX25Q9H3E2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.32■■■□□ 2.44
SNX25Q9H3E2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SNX25Q9H3E2 EBPL-203ENST00000378270 579 ntTSL 2 BASIC30.28■■■□□ 2.44
SNX25Q9H3E2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
SNX25Q9H3E2 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
SNX25Q9H3E2 MVK-208ENST00000539696 608 ntTSL 5 BASIC30.24■■■□□ 2.43
SNX25Q9H3E2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.24■■■□□ 2.43
SNX25Q9H3E2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.24■■■□□ 2.43
SNX25Q9H3E2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.22■■■□□ 2.43
SNX25Q9H3E2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.21■■■□□ 2.43
SNX25Q9H3E2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC30.2■■■□□ 2.43
SNX25Q9H3E2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
SNX25Q9H3E2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SNX25Q9H3E2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SNX25Q9H3E2 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SNX25Q9H3E2 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
SNX25Q9H3E2 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.14■■■□□ 2.42
SNX25Q9H3E2 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
SNX25Q9H3E2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNX25Q9H3E2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
SNX25Q9H3E2 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC30.08■■■□□ 2.41
SNX25Q9H3E2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.06■■■□□ 2.4
SNX25Q9H3E2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC30.02■■■□□ 2.4
SNX25Q9H3E2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.4
SNX25Q9H3E2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SNX25Q9H3E2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.98■■■□□ 2.39
SNX25Q9H3E2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
SNX25Q9H3E2 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SNX25Q9H3E2 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC29.96■■■□□ 2.39
SNX25Q9H3E2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC29.95■■■□□ 2.39
SNX25Q9H3E2 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC29.95■■■□□ 2.38
SNX25Q9H3E2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC29.93■■■□□ 2.38
SNX25Q9H3E2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
SNX25Q9H3E2 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC29.9■■■□□ 2.38
SNX25Q9H3E2 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.89■■■□□ 2.38
SNX25Q9H3E2 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SNX25Q9H3E2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
SNX25Q9H3E2 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
SNX25Q9H3E2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC29.87■■■□□ 2.37
SNX25Q9H3E2 RARRES2P7-201ENST00000567349 469 ntBASIC29.86■■■□□ 2.37
SNX25Q9H3E2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC29.85■■■□□ 2.37
SNX25Q9H3E2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SNX25Q9H3E2 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC29.83■■■□□ 2.37
SNX25Q9H3E2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SNX25Q9H3E2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC29.81■■■□□ 2.36
SNX25Q9H3E2 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC29.8■■■□□ 2.36
SNX25Q9H3E2 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
SNX25Q9H3E2 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SNX25Q9H3E2 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SNX25Q9H3E2 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC29.75■■■□□ 2.35
SNX25Q9H3E2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.74■■■□□ 2.35
SNX25Q9H3E2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC29.74■■■□□ 2.35
SNX25Q9H3E2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms