Protein–RNA interactions for Protein: Q9H0Q0

FAM49A, Protein FAM49A, humanhuman

Predicted RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49AQ9H0Q0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.33■■■□□ 2.77
FAM49AQ9H0Q0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.77
FAM49AQ9H0Q0 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC32.32■■■□□ 2.76
FAM49AQ9H0Q0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.32■■■□□ 2.76
FAM49AQ9H0Q0 AL031258.1-201ENST00000623562 325 ntBASIC32.26■■■□□ 2.75
FAM49AQ9H0Q0 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.25■■■□□ 2.75
FAM49AQ9H0Q0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
FAM49AQ9H0Q0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC32.18■■■□□ 2.74
FAM49AQ9H0Q0 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
FAM49AQ9H0Q0 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
FAM49AQ9H0Q0 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
FAM49AQ9H0Q0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
FAM49AQ9H0Q0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
FAM49AQ9H0Q0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC32.06■■■□□ 2.72
FAM49AQ9H0Q0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC32.04■■■□□ 2.72
FAM49AQ9H0Q0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC32.04■■■□□ 2.72
FAM49AQ9H0Q0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC32.01■■■□□ 2.72
FAM49AQ9H0Q0 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
FAM49AQ9H0Q0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
FAM49AQ9H0Q0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC31.95■■■□□ 2.71
FAM49AQ9H0Q0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
FAM49AQ9H0Q0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC31.91■■■□□ 2.7
FAM49AQ9H0Q0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
FAM49AQ9H0Q0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC31.86■■■□□ 2.69
FAM49AQ9H0Q0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC31.86■■■□□ 2.69
FAM49AQ9H0Q0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
FAM49AQ9H0Q0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC31.84■■■□□ 2.69
FAM49AQ9H0Q0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
FAM49AQ9H0Q0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC31.8■■■□□ 2.68
FAM49AQ9H0Q0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC31.77■■■□□ 2.68
FAM49AQ9H0Q0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC31.77■■■□□ 2.68
FAM49AQ9H0Q0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
FAM49AQ9H0Q0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
FAM49AQ9H0Q0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC31.73■■■□□ 2.67
FAM49AQ9H0Q0 RARRES2P7-201ENST00000567349 469 ntBASIC31.7■■■□□ 2.67
FAM49AQ9H0Q0 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC31.68■■■□□ 2.66
FAM49AQ9H0Q0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
FAM49AQ9H0Q0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC31.66■■■□□ 2.66
FAM49AQ9H0Q0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC31.65■■■□□ 2.66
FAM49AQ9H0Q0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
FAM49AQ9H0Q0 AC145285.7-201ENST00000614819 1539 ntBASIC31.64■■■□□ 2.66
FAM49AQ9H0Q0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
FAM49AQ9H0Q0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
FAM49AQ9H0Q0 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC31.6■■■□□ 2.65
FAM49AQ9H0Q0 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
FAM49AQ9H0Q0 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC31.59■■■□□ 2.65
FAM49AQ9H0Q0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC31.57■■■□□ 2.64
FAM49AQ9H0Q0 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC31.57■■■□□ 2.64
FAM49AQ9H0Q0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
FAM49AQ9H0Q0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC31.56■■■□□ 2.64
FAM49AQ9H0Q0 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.64
FAM49AQ9H0Q0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC31.51■■■□□ 2.63
FAM49AQ9H0Q0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC31.5■■■□□ 2.63
FAM49AQ9H0Q0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC31.49■■■□□ 2.63
FAM49AQ9H0Q0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC31.47■■■□□ 2.63
FAM49AQ9H0Q0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
FAM49AQ9H0Q0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC31.45■■■□□ 2.63
FAM49AQ9H0Q0 MVK-208ENST00000539696 608 ntTSL 5 BASIC31.44■■■□□ 2.62
FAM49AQ9H0Q0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC31.44■■■□□ 2.62
FAM49AQ9H0Q0 SETD8P1-201ENST00000623146 1180 ntBASIC31.44■■■□□ 2.62
FAM49AQ9H0Q0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
FAM49AQ9H0Q0 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
FAM49AQ9H0Q0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC31.42■■■□□ 2.62
FAM49AQ9H0Q0 AC097358.2-201ENST00000607541 1159 ntBASIC31.42■■■□□ 2.62
FAM49AQ9H0Q0 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
FAM49AQ9H0Q0 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
FAM49AQ9H0Q0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC31.38■■■□□ 2.61
FAM49AQ9H0Q0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
FAM49AQ9H0Q0 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
FAM49AQ9H0Q0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
FAM49AQ9H0Q0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC31.33■■■□□ 2.61
FAM49AQ9H0Q0 AC136428.2-201ENST00000563187 214 ntBASIC31.33■■■□□ 2.61
FAM49AQ9H0Q0 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
FAM49AQ9H0Q0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
FAM49AQ9H0Q0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.27■■■□□ 2.6
FAM49AQ9H0Q0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC31.26■■■□□ 2.59
FAM49AQ9H0Q0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
FAM49AQ9H0Q0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
FAM49AQ9H0Q0 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
FAM49AQ9H0Q0 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC31.2■■■□□ 2.59
FAM49AQ9H0Q0 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC31.2■■■□□ 2.59
FAM49AQ9H0Q0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC31.18■■■□□ 2.58
FAM49AQ9H0Q0 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC31.18■■■□□ 2.58
FAM49AQ9H0Q0 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC31.17■■■□□ 2.58
FAM49AQ9H0Q0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
FAM49AQ9H0Q0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
FAM49AQ9H0Q0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC31.12■■■□□ 2.57
FAM49AQ9H0Q0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC31.12■■■□□ 2.57
FAM49AQ9H0Q0 SUZ12P1-203ENST00000578195 985 ntBASIC31.11■■■□□ 2.57
FAM49AQ9H0Q0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
FAM49AQ9H0Q0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
FAM49AQ9H0Q0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
FAM49AQ9H0Q0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC31.09■■■□□ 2.57
FAM49AQ9H0Q0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
FAM49AQ9H0Q0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
FAM49AQ9H0Q0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
FAM49AQ9H0Q0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
FAM49AQ9H0Q0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
FAM49AQ9H0Q0 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
FAM49AQ9H0Q0 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms