Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RARRES2P7-201ENST00000567349 469 ntBASIC25.64■■□□□ 1.69
CSMD1Q96PZ7 SUZ12P1-203ENST00000578195 985 ntBASIC25.58■■□□□ 1.69
CSMD1Q96PZ7 AL031258.1-201ENST00000623562 325 ntBASIC25.57■■□□□ 1.68
CSMD1Q96PZ7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CSMD1Q96PZ7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CSMD1Q96PZ7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CSMD1Q96PZ7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
CSMD1Q96PZ7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.45■■□□□ 1.66
CSMD1Q96PZ7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CSMD1Q96PZ7 AC097358.2-201ENST00000607541 1159 ntBASIC25.4■■□□□ 1.66
CSMD1Q96PZ7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CSMD1Q96PZ7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSMD1Q96PZ7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CSMD1Q96PZ7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC25.38■■□□□ 1.65
CSMD1Q96PZ7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.34■■□□□ 1.65
CSMD1Q96PZ7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSMD1Q96PZ7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.29■■□□□ 1.64
CSMD1Q96PZ7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
CSMD1Q96PZ7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CSMD1Q96PZ7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
CSMD1Q96PZ7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.26■■□□□ 1.63
CSMD1Q96PZ7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CSMD1Q96PZ7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.22■■□□□ 1.63
CSMD1Q96PZ7 AL162393.1-201ENST00000437852 946 ntBASIC25.22■■□□□ 1.63
CSMD1Q96PZ7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.2■■□□□ 1.62
CSMD1Q96PZ7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC25.18■■□□□ 1.62
CSMD1Q96PZ7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.18■■□□□ 1.62
CSMD1Q96PZ7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CSMD1Q96PZ7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.16■■□□□ 1.62
CSMD1Q96PZ7 SETD8P1-201ENST00000623146 1180 ntBASIC25.16■■□□□ 1.62
CSMD1Q96PZ7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.15■■□□□ 1.62
CSMD1Q96PZ7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.15■■□□□ 1.62
CSMD1Q96PZ7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CSMD1Q96PZ7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CSMD1Q96PZ7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
CSMD1Q96PZ7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.08■■□□□ 1.61
CSMD1Q96PZ7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CSMD1Q96PZ7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CSMD1Q96PZ7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC25.03■■□□□ 1.6
CSMD1Q96PZ7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
CSMD1Q96PZ7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC24.98■■□□□ 1.59
CSMD1Q96PZ7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.97■■□□□ 1.59
CSMD1Q96PZ7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.96■■□□□ 1.59
CSMD1Q96PZ7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
CSMD1Q96PZ7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.95■■□□□ 1.58
CSMD1Q96PZ7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
CSMD1Q96PZ7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.94■■□□□ 1.58
CSMD1Q96PZ7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.58
CSMD1Q96PZ7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
CSMD1Q96PZ7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.93■■□□□ 1.58
CSMD1Q96PZ7 HLA-V-202ENST00000446817 847 ntBASIC24.9■■□□□ 1.58
CSMD1Q96PZ7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.9■■□□□ 1.58
CSMD1Q96PZ7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.89■■□□□ 1.58
CSMD1Q96PZ7 MIR7108-201ENST00000614319 87 ntBASIC24.89■■□□□ 1.58
CSMD1Q96PZ7 ABHD17AP4-201ENST00000411545 909 ntBASIC24.88■■□□□ 1.57
CSMD1Q96PZ7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CSMD1Q96PZ7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.85■■□□□ 1.57
CSMD1Q96PZ7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.85■■□□□ 1.57
CSMD1Q96PZ7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.85■■□□□ 1.57
CSMD1Q96PZ7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CSMD1Q96PZ7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC24.82■■□□□ 1.56
CSMD1Q96PZ7 AP006261.1-201ENST00000584783 668 ntBASIC24.82■■□□□ 1.56
CSMD1Q96PZ7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
CSMD1Q96PZ7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CSMD1Q96PZ7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.8■■□□□ 1.56
CSMD1Q96PZ7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CSMD1Q96PZ7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.79■■□□□ 1.56
CSMD1Q96PZ7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
CSMD1Q96PZ7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
CSMD1Q96PZ7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CSMD1Q96PZ7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
CSMD1Q96PZ7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CSMD1Q96PZ7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
CSMD1Q96PZ7 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CSMD1Q96PZ7 CAHM-201ENST00000604200 896 ntBASIC24.73■■□□□ 1.55
CSMD1Q96PZ7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSMD1Q96PZ7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CSMD1Q96PZ7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
CSMD1Q96PZ7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
CSMD1Q96PZ7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.69■■□□□ 1.54
CSMD1Q96PZ7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
CSMD1Q96PZ7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.66■■□□□ 1.54
CSMD1Q96PZ7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.65■■□□□ 1.54
CSMD1Q96PZ7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
CSMD1Q96PZ7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
CSMD1Q96PZ7 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.62■■□□□ 1.53
CSMD1Q96PZ7 AL391121.1-201ENST00000607967 1349 ntBASIC24.61■■□□□ 1.53
CSMD1Q96PZ7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.6■■□□□ 1.53
CSMD1Q96PZ7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CSMD1Q96PZ7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.57■■□□□ 1.52
CSMD1Q96PZ7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CSMD1Q96PZ7 MLEC-202ENST00000412616 841 ntTSL 3 BASIC24.53■■□□□ 1.52
CSMD1Q96PZ7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC24.53■■□□□ 1.52
CSMD1Q96PZ7 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC24.52■■□□□ 1.52
CSMD1Q96PZ7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.49■■□□□ 1.51
CSMD1Q96PZ7 AC087741.3-201ENST00000624270 1347 ntBASIC24.49■■□□□ 1.51
CSMD1Q96PZ7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC24.49■■□□□ 1.51
CSMD1Q96PZ7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.49■■□□□ 1.51
CSMD1Q96PZ7 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
CSMD1Q96PZ7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.47■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms