Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.37■■□□□ 1.65
SPG11Q96JI7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.37■■□□□ 1.65
SPG11Q96JI7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC25.36■■□□□ 1.65
SPG11Q96JI7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.35■■□□□ 1.65
SPG11Q96JI7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
SPG11Q96JI7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.31■■□□□ 1.64
SPG11Q96JI7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
SPG11Q96JI7 RPS2P35-201ENST00000443417 897 ntBASIC25.3■■□□□ 1.64
SPG11Q96JI7 AL031258.1-201ENST00000623562 325 ntBASIC25.3■■□□□ 1.64
SPG11Q96JI7 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.29■■□□□ 1.64
SPG11Q96JI7 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.29■■□□□ 1.64
SPG11Q96JI7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
SPG11Q96JI7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.28■■□□□ 1.64
SPG11Q96JI7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
SPG11Q96JI7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC25.26■■□□□ 1.63
SPG11Q96JI7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.17■■□□□ 1.62
SPG11Q96JI7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SPG11Q96JI7 AC097358.2-201ENST00000607541 1159 ntBASIC25.13■■□□□ 1.61
SPG11Q96JI7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SPG11Q96JI7 AC136428.2-201ENST00000563187 214 ntBASIC25.11■■□□□ 1.61
SPG11Q96JI7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.1■■□□□ 1.61
SPG11Q96JI7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.09■■□□□ 1.61
SPG11Q96JI7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.08■■□□□ 1.61
SPG11Q96JI7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
SPG11Q96JI7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SPG11Q96JI7 SUZ12P1-203ENST00000578195 985 ntBASIC25.05■■□□□ 1.6
SPG11Q96JI7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
SPG11Q96JI7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC25.03■■□□□ 1.6
SPG11Q96JI7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SPG11Q96JI7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SPG11Q96JI7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
SPG11Q96JI7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
SPG11Q96JI7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC24.94■■□□□ 1.58
SPG11Q96JI7 SETD8P1-201ENST00000623146 1180 ntBASIC24.94■■□□□ 1.58
SPG11Q96JI7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC24.94■■□□□ 1.58
SPG11Q96JI7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC24.93■■□□□ 1.58
SPG11Q96JI7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC24.92■■□□□ 1.58
SPG11Q96JI7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.92■■□□□ 1.58
SPG11Q96JI7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC24.92■■□□□ 1.58
SPG11Q96JI7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.92■■□□□ 1.58
SPG11Q96JI7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SPG11Q96JI7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC24.88■■□□□ 1.57
SPG11Q96JI7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.87■■□□□ 1.57
SPG11Q96JI7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SPG11Q96JI7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
SPG11Q96JI7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SPG11Q96JI7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC24.84■■□□□ 1.57
SPG11Q96JI7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC24.84■■□□□ 1.57
SPG11Q96JI7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SPG11Q96JI7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SPG11Q96JI7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC24.81■■□□□ 1.56
SPG11Q96JI7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
SPG11Q96JI7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC24.7■■□□□ 1.54
SPG11Q96JI7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.69■■□□□ 1.54
SPG11Q96JI7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SPG11Q96JI7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.65■■□□□ 1.54
SPG11Q96JI7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.64■■□□□ 1.53
SPG11Q96JI7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
SPG11Q96JI7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.62■■□□□ 1.53
SPG11Q96JI7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.62■■□□□ 1.53
SPG11Q96JI7 AL162393.1-201ENST00000437852 946 ntBASIC24.61■■□□□ 1.53
SPG11Q96JI7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.59■■□□□ 1.53
SPG11Q96JI7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
SPG11Q96JI7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG11Q96JI7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
SPG11Q96JI7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
SPG11Q96JI7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SPG11Q96JI7 AP006261.1-201ENST00000584783 668 ntBASIC24.55■■□□□ 1.52
SPG11Q96JI7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
SPG11Q96JI7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
SPG11Q96JI7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
SPG11Q96JI7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
SPG11Q96JI7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SPG11Q96JI7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SPG11Q96JI7 AL391121.1-201ENST00000607967 1349 ntBASIC24.48■■□□□ 1.51
SPG11Q96JI7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SPG11Q96JI7 HNRNPLP2-201ENST00000568980 1570 ntBASIC24.47■■□□□ 1.51
SPG11Q96JI7 CAHM-201ENST00000604200 896 ntBASIC24.46■■□□□ 1.51
SPG11Q96JI7 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC24.45■■□□□ 1.51
SPG11Q96JI7 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SPG11Q96JI7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SPG11Q96JI7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.43■■□□□ 1.5
SPG11Q96JI7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.43■■□□□ 1.5
SPG11Q96JI7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SPG11Q96JI7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
SPG11Q96JI7 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SPG11Q96JI7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SPG11Q96JI7 ABHD17AP4-201ENST00000411545 909 ntBASIC24.4■■□□□ 1.5
SPG11Q96JI7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
SPG11Q96JI7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
SPG11Q96JI7 AC145285.7-201ENST00000614819 1539 ntBASIC24.37■■□□□ 1.49
SPG11Q96JI7 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
SPG11Q96JI7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
SPG11Q96JI7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
SPG11Q96JI7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC24.35■■□□□ 1.49
SPG11Q96JI7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.35■■□□□ 1.49
SPG11Q96JI7 HLA-V-202ENST00000446817 847 ntBASIC24.35■■□□□ 1.49
SPG11Q96JI7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC24.34■■□□□ 1.49
SPG11Q96JI7 MIR7108-201ENST00000614319 87 ntBASIC24.33■■□□□ 1.49
SPG11Q96JI7 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms