Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
CNEP1R1Q8N9A8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
CNEP1R1Q8N9A8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
CNEP1R1Q8N9A8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
CNEP1R1Q8N9A8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
CNEP1R1Q8N9A8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.7
CNEP1R1Q8N9A8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
CNEP1R1Q8N9A8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
CNEP1R1Q8N9A8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CNEP1R1Q8N9A8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC25.62■■□□□ 1.69
CNEP1R1Q8N9A8 AL031258.1-201ENST00000623562 325 ntBASIC25.59■■□□□ 1.69
CNEP1R1Q8N9A8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CNEP1R1Q8N9A8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
CNEP1R1Q8N9A8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CNEP1R1Q8N9A8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.57■■□□□ 1.68
CNEP1R1Q8N9A8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CNEP1R1Q8N9A8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CNEP1R1Q8N9A8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC25.56■■□□□ 1.68
CNEP1R1Q8N9A8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC25.55■■□□□ 1.68
CNEP1R1Q8N9A8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CNEP1R1Q8N9A8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.51■■□□□ 1.68
CNEP1R1Q8N9A8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
CNEP1R1Q8N9A8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
CNEP1R1Q8N9A8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
CNEP1R1Q8N9A8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC25.48■■□□□ 1.67
CNEP1R1Q8N9A8 AC145285.7-201ENST00000614819 1539 ntBASIC25.47■■□□□ 1.67
CNEP1R1Q8N9A8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CNEP1R1Q8N9A8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.44■■□□□ 1.66
CNEP1R1Q8N9A8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.44■■□□□ 1.66
CNEP1R1Q8N9A8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
CNEP1R1Q8N9A8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
CNEP1R1Q8N9A8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CNEP1R1Q8N9A8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CNEP1R1Q8N9A8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CNEP1R1Q8N9A8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CNEP1R1Q8N9A8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC25.38■■□□□ 1.65
CNEP1R1Q8N9A8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC25.35■■□□□ 1.65
CNEP1R1Q8N9A8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
CNEP1R1Q8N9A8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC25.33■■□□□ 1.65
CNEP1R1Q8N9A8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC25.32■■□□□ 1.64
CNEP1R1Q8N9A8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
CNEP1R1Q8N9A8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
CNEP1R1Q8N9A8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC25.3■■□□□ 1.64
CNEP1R1Q8N9A8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.3■■□□□ 1.64
CNEP1R1Q8N9A8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.28■■□□□ 1.64
CNEP1R1Q8N9A8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
CNEP1R1Q8N9A8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
CNEP1R1Q8N9A8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.24■■□□□ 1.63
CNEP1R1Q8N9A8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CNEP1R1Q8N9A8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
CNEP1R1Q8N9A8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CNEP1R1Q8N9A8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CNEP1R1Q8N9A8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CNEP1R1Q8N9A8 MVK-208ENST00000539696 608 ntTSL 5 BASIC25.18■■□□□ 1.62
CNEP1R1Q8N9A8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CNEP1R1Q8N9A8 RARRES2P7-201ENST00000567349 469 ntBASIC25.18■■□□□ 1.62
CNEP1R1Q8N9A8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.17■■□□□ 1.62
CNEP1R1Q8N9A8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CNEP1R1Q8N9A8 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CNEP1R1Q8N9A8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CNEP1R1Q8N9A8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CNEP1R1Q8N9A8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC25.08■■□□□ 1.61
CNEP1R1Q8N9A8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CNEP1R1Q8N9A8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC25.07■■□□□ 1.6
CNEP1R1Q8N9A8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CNEP1R1Q8N9A8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CNEP1R1Q8N9A8 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
CNEP1R1Q8N9A8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.05■■□□□ 1.6
CNEP1R1Q8N9A8 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CNEP1R1Q8N9A8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC25.03■■□□□ 1.6
CNEP1R1Q8N9A8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.02■■□□□ 1.6
CNEP1R1Q8N9A8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
CNEP1R1Q8N9A8 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
CNEP1R1Q8N9A8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC25■■□□□ 1.59
CNEP1R1Q8N9A8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
CNEP1R1Q8N9A8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC25■■□□□ 1.59
CNEP1R1Q8N9A8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
CNEP1R1Q8N9A8 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC24.98■■□□□ 1.59
CNEP1R1Q8N9A8 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
CNEP1R1Q8N9A8 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC24.97■■□□□ 1.59
CNEP1R1Q8N9A8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC24.97■■□□□ 1.59
CNEP1R1Q8N9A8 SETD8P1-201ENST00000623146 1180 ntBASIC24.96■■□□□ 1.59
CNEP1R1Q8N9A8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
CNEP1R1Q8N9A8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC24.95■■□□□ 1.58
CNEP1R1Q8N9A8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
CNEP1R1Q8N9A8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC24.92■■□□□ 1.58
CNEP1R1Q8N9A8 AC097358.2-201ENST00000607541 1159 ntBASIC24.9■■□□□ 1.58
CNEP1R1Q8N9A8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC24.9■■□□□ 1.58
CNEP1R1Q8N9A8 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CNEP1R1Q8N9A8 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CNEP1R1Q8N9A8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.87■■□□□ 1.57
CNEP1R1Q8N9A8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.86■■□□□ 1.57
CNEP1R1Q8N9A8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CNEP1R1Q8N9A8 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC24.84■■□□□ 1.57
CNEP1R1Q8N9A8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC24.84■■□□□ 1.57
CNEP1R1Q8N9A8 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
CNEP1R1Q8N9A8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC24.82■■□□□ 1.56
CNEP1R1Q8N9A8 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CNEP1R1Q8N9A8 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CNEP1R1Q8N9A8 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms