Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC38.44■■■■□ 3.74
CCDC146Q8IYE0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC38.4■■■■□ 3.74
CCDC146Q8IYE0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
CCDC146Q8IYE0 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
CCDC146Q8IYE0 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC38.31■■■■□ 3.72
CCDC146Q8IYE0 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC38.29■■■■□ 3.72
CCDC146Q8IYE0 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
CCDC146Q8IYE0 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC38.23■■■■□ 3.71
CCDC146Q8IYE0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC38.2■■■■□ 3.71
CCDC146Q8IYE0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC38.17■■■■□ 3.7
CCDC146Q8IYE0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC38.16■■■■□ 3.7
CCDC146Q8IYE0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC38.15■■■■□ 3.7
CCDC146Q8IYE0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
CCDC146Q8IYE0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
CCDC146Q8IYE0 AP002365.1-201ENST00000603448 772 ntBASIC38.06■■■■□ 3.68
CCDC146Q8IYE0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC38.05■■■■□ 3.68
CCDC146Q8IYE0 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC38.03■■■■□ 3.68
CCDC146Q8IYE0 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC38.03■■■■□ 3.68
CCDC146Q8IYE0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CCDC146Q8IYE0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CCDC146Q8IYE0 DYNLL1-208ENST00000550178 581 ntBASIC38.02■■■■□ 3.68
CCDC146Q8IYE0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC38.02■■■■□ 3.68
CCDC146Q8IYE0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC38■■■■□ 3.67
CCDC146Q8IYE0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC38■■■■□ 3.67
CCDC146Q8IYE0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC37.99■■■■□ 3.67
CCDC146Q8IYE0 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC37.99■■■■□ 3.67
CCDC146Q8IYE0 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC37.98■■■■□ 3.67
CCDC146Q8IYE0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC37.98■■■■□ 3.67
CCDC146Q8IYE0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC37.97■■■■□ 3.67
CCDC146Q8IYE0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.97■■■■□ 3.67
CCDC146Q8IYE0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC37.96■■■■□ 3.67
CCDC146Q8IYE0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC37.95■■■■□ 3.67
CCDC146Q8IYE0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC37.94■■■■□ 3.66
CCDC146Q8IYE0 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC37.93■■■■□ 3.66
CCDC146Q8IYE0 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
CCDC146Q8IYE0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC37.88■■■■□ 3.66
CCDC146Q8IYE0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
CCDC146Q8IYE0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC37.85■■■■□ 3.65
CCDC146Q8IYE0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC37.85■■■■□ 3.65
CCDC146Q8IYE0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC37.85■■■■□ 3.65
CCDC146Q8IYE0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC37.81■■■■□ 3.64
CCDC146Q8IYE0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
CCDC146Q8IYE0 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
CCDC146Q8IYE0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC37.8■■■■□ 3.64
CCDC146Q8IYE0 AL031258.1-201ENST00000623562 325 ntBASIC37.74■■■■□ 3.63
CCDC146Q8IYE0 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC37.72■■■■□ 3.63
CCDC146Q8IYE0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC37.71■■■■□ 3.63
CCDC146Q8IYE0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC37.71■■■■□ 3.63
CCDC146Q8IYE0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC37.71■■■■□ 3.63
CCDC146Q8IYE0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC37.7■■■■□ 3.63
CCDC146Q8IYE0 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC37.65■■■■□ 3.62
CCDC146Q8IYE0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
CCDC146Q8IYE0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC37.64■■■■□ 3.62
CCDC146Q8IYE0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC37.64■■■■□ 3.62
CCDC146Q8IYE0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC37.63■■■■□ 3.61
CCDC146Q8IYE0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC37.61■■■■□ 3.61
CCDC146Q8IYE0 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
CCDC146Q8IYE0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC37.6■■■■□ 3.61
CCDC146Q8IYE0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC37.59■■■■□ 3.61
CCDC146Q8IYE0 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC37.59■■■■□ 3.61
CCDC146Q8IYE0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC37.59■■■■□ 3.61
CCDC146Q8IYE0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC37.56■■■■□ 3.6
CCDC146Q8IYE0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC37.56■■■■□ 3.6
CCDC146Q8IYE0 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC37.54■■■■□ 3.6
CCDC146Q8IYE0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC37.52■■■■□ 3.6
CCDC146Q8IYE0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC37.5■■■■□ 3.59
CCDC146Q8IYE0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC37.5■■■■□ 3.59
CCDC146Q8IYE0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC37.47■■■■□ 3.59
CCDC146Q8IYE0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC37.46■■■■□ 3.59
CCDC146Q8IYE0 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC37.45■■■■□ 3.59
CCDC146Q8IYE0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC37.45■■■■□ 3.59
CCDC146Q8IYE0 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
CCDC146Q8IYE0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC37.42■■■■□ 3.58
CCDC146Q8IYE0 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC37.36■■■■□ 3.57
CCDC146Q8IYE0 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
CCDC146Q8IYE0 MVK-208ENST00000539696 608 ntTSL 5 BASIC37.34■■■■□ 3.57
CCDC146Q8IYE0 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC37.33■■■■□ 3.57
CCDC146Q8IYE0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CCDC146Q8IYE0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC37.33■■■■□ 3.57
CCDC146Q8IYE0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC37.3■■■■□ 3.56
CCDC146Q8IYE0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC37.3■■■■□ 3.56
CCDC146Q8IYE0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
CCDC146Q8IYE0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC37.29■■■■□ 3.56
CCDC146Q8IYE0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC37.28■■■■□ 3.56
CCDC146Q8IYE0 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC37.26■■■■□ 3.56
CCDC146Q8IYE0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC37.24■■■■□ 3.55
CCDC146Q8IYE0 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC37.24■■■■□ 3.55
CCDC146Q8IYE0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC37.21■■■■□ 3.55
CCDC146Q8IYE0 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC37.2■■■■□ 3.55
CCDC146Q8IYE0 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
CCDC146Q8IYE0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC37.18■■■■□ 3.54
CCDC146Q8IYE0 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC37.18■■■■□ 3.54
CCDC146Q8IYE0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC37.17■■■■□ 3.54
CCDC146Q8IYE0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
CCDC146Q8IYE0 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC37.1■■■■□ 3.53
CCDC146Q8IYE0 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC37.06■■■■□ 3.52
CCDC146Q8IYE0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC37.05■■■■□ 3.52
CCDC146Q8IYE0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC37.03■■■■□ 3.52
CCDC146Q8IYE0 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC37.02■■■■□ 3.52
CCDC146Q8IYE0 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC37.01■■■■□ 3.52
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms