Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC43.14■■■■■ 4.5
UBR1Q8IWV7 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC43.13■■■■■ 4.49
UBR1Q8IWV7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC43.08■■■■■ 4.49
UBR1Q8IWV7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC43.05■■■■■ 4.48
UBR1Q8IWV7 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC43.01■■■■■ 4.48
UBR1Q8IWV7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC42.95■■■■■ 4.47
UBR1Q8IWV7 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC42.94■■■■■ 4.46
UBR1Q8IWV7 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC42.93■■■■■ 4.46
UBR1Q8IWV7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC42.92■■■■■ 4.46
UBR1Q8IWV7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC42.88■■■■■ 4.45
UBR1Q8IWV7 RARRES2P7-201ENST00000567349 469 ntBASIC42.87■■■■■ 4.45
UBR1Q8IWV7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC42.85■■■■■ 4.45
UBR1Q8IWV7 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC42.84■■■■■ 4.45
UBR1Q8IWV7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC42.81■■■■■ 4.44
UBR1Q8IWV7 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC42.81■■■■■ 4.44
UBR1Q8IWV7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC42.78■■■■■ 4.44
UBR1Q8IWV7 AC136428.2-201ENST00000563187 214 ntBASIC42.7■■■■■ 4.43
UBR1Q8IWV7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC42.65■■■■■ 4.42
UBR1Q8IWV7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC42.62■■■■■ 4.41
UBR1Q8IWV7 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC42.6■■■■■ 4.41
UBR1Q8IWV7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC42.59■■■■■ 4.41
UBR1Q8IWV7 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC42.58■■■■■ 4.41
UBR1Q8IWV7 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC42.57■■■■■ 4.41
UBR1Q8IWV7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC42.53■■■■■ 4.4
UBR1Q8IWV7 SUZ12P1-203ENST00000578195 985 ntBASIC42.53■■■■■ 4.4
UBR1Q8IWV7 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC42.49■■■■■ 4.39
UBR1Q8IWV7 AC097358.2-201ENST00000607541 1159 ntBASIC42.47■■■■■ 4.39
UBR1Q8IWV7 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC42.43■■■■■ 4.38
UBR1Q8IWV7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC42.42■■■■■ 4.38
UBR1Q8IWV7 SETD8P1-201ENST00000623146 1180 ntBASIC42.41■■■■■ 4.38
UBR1Q8IWV7 EBPL-203ENST00000378270 579 ntTSL 2 BASIC42.39■■■■■ 4.38
UBR1Q8IWV7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC42.38■■■■■ 4.37
UBR1Q8IWV7 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC42.33■■■■■ 4.37
UBR1Q8IWV7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC42.33■■■■■ 4.37
UBR1Q8IWV7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC42.31■■■■■ 4.36
UBR1Q8IWV7 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC42.31■■■■■ 4.36
UBR1Q8IWV7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC42.3■■■■■ 4.36
UBR1Q8IWV7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC42.29■■■■■ 4.36
UBR1Q8IWV7 RPS2P35-201ENST00000443417 897 ntBASIC42.28■■■■■ 4.36
UBR1Q8IWV7 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC42.26■■■■■ 4.36
UBR1Q8IWV7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC42.26■■■■■ 4.36
UBR1Q8IWV7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC42.26■■■■■ 4.36
UBR1Q8IWV7 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC42.23■■■■■ 4.35
UBR1Q8IWV7 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC42.18■■■■■ 4.34
UBR1Q8IWV7 KLF16-203ENST00000592313 508 ntTSL 3 BASIC42.12■■■■■ 4.33
UBR1Q8IWV7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC42.12■■■■■ 4.33
UBR1Q8IWV7 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC42.12■■■■■ 4.33
UBR1Q8IWV7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC42.11■■■■■ 4.33
UBR1Q8IWV7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC42.1■■■■■ 4.33
UBR1Q8IWV7 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC42.09■■■■■ 4.33
UBR1Q8IWV7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC42.09■■■■■ 4.33
UBR1Q8IWV7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC42.08■■■■■ 4.33
UBR1Q8IWV7 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC42.05■■■■■ 4.32
UBR1Q8IWV7 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC42.02■■■■■ 4.32
UBR1Q8IWV7 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC41.98■■■■■ 4.31
UBR1Q8IWV7 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC41.95■■■■■ 4.31
UBR1Q8IWV7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC41.94■■■■■ 4.3
UBR1Q8IWV7 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC41.94■■■■■ 4.3
UBR1Q8IWV7 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC41.9■■■■■ 4.3
UBR1Q8IWV7 AL162393.1-201ENST00000437852 946 ntBASIC41.86■■■■■ 4.29
UBR1Q8IWV7 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC41.81■■■■■ 4.28
UBR1Q8IWV7 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC41.74■■■■■ 4.27
UBR1Q8IWV7 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC41.72■■■■■ 4.27
UBR1Q8IWV7 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC41.69■■■■■ 4.26
UBR1Q8IWV7 NRG1-221ENST00000614767 762 ntTSL 5 BASIC41.65■■■■■ 4.26
UBR1Q8IWV7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC41.64■■■■■ 4.26
UBR1Q8IWV7 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC41.63■■■■■ 4.25
UBR1Q8IWV7 CAHM-201ENST00000604200 896 ntBASIC41.61■■■■■ 4.25
UBR1Q8IWV7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC41.61■■■■■ 4.25
UBR1Q8IWV7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC41.58■■■■■ 4.25
UBR1Q8IWV7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC41.57■■■■■ 4.25
UBR1Q8IWV7 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC41.55■■■■■ 4.24
UBR1Q8IWV7 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC41.55■■■■■ 4.24
UBR1Q8IWV7 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC41.55■■■■■ 4.24
UBR1Q8IWV7 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC41.54■■■■■ 4.24
UBR1Q8IWV7 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC41.53■■■■■ 4.24
UBR1Q8IWV7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC41.5■■■■■ 4.23
UBR1Q8IWV7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC41.48■■■■■ 4.23
UBR1Q8IWV7 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC41.47■■■■■ 4.23
UBR1Q8IWV7 AL391121.1-201ENST00000607967 1349 ntBASIC41.47■■■■■ 4.23
UBR1Q8IWV7 AC145285.7-201ENST00000614819 1539 ntBASIC41.44■■■■■ 4.22
UBR1Q8IWV7 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC41.44■■■■■ 4.22
UBR1Q8IWV7 AP006261.1-201ENST00000584783 668 ntBASIC41.43■■■■■ 4.22
UBR1Q8IWV7 HNRNPLP2-201ENST00000568980 1570 ntBASIC41.42■■■■■ 4.22
UBR1Q8IWV7 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
UBR1Q8IWV7 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC41.41■■■■■ 4.22
UBR1Q8IWV7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC41.4■■■■■ 4.22
UBR1Q8IWV7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC41.38■■■■■ 4.21
UBR1Q8IWV7 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC41.36■■■■■ 4.21
UBR1Q8IWV7 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC41.36■■■■■ 4.21
UBR1Q8IWV7 MVK-208ENST00000539696 608 ntTSL 5 BASIC41.36■■■■■ 4.21
UBR1Q8IWV7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC41.35■■■■■ 4.21
UBR1Q8IWV7 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC41.34■■■■■ 4.21
UBR1Q8IWV7 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC41.33■■■■■ 4.21
UBR1Q8IWV7 AL133380.1-201ENST00000506013 324 ntBASIC41.32■■■■■ 4.21
UBR1Q8IWV7 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC41.32■■■■■ 4.2
UBR1Q8IWV7 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC41.32■■■■■ 4.2
UBR1Q8IWV7 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
UBR1Q8IWV7 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC41.25■■■■■ 4.19
UBR1Q8IWV7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC41.25■■■■■ 4.19
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms