Protein–RNA interactions for Protein: Q5JSQ8

KHDC1L, Putative KHDC1-like protein, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1LQ5JSQ8 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.7■■□□□ 1.22
KHDC1LQ5JSQ8 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
KHDC1LQ5JSQ8 DYNLL1-208ENST00000550178 581 ntBASIC22.68■■□□□ 1.22
KHDC1LQ5JSQ8 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
KHDC1LQ5JSQ8 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
KHDC1LQ5JSQ8 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
KHDC1LQ5JSQ8 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
KHDC1LQ5JSQ8 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
KHDC1LQ5JSQ8 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
KHDC1LQ5JSQ8 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
KHDC1LQ5JSQ8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
KHDC1LQ5JSQ8 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
KHDC1LQ5JSQ8 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
KHDC1LQ5JSQ8 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
KHDC1LQ5JSQ8 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
KHDC1LQ5JSQ8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
KHDC1LQ5JSQ8 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
KHDC1LQ5JSQ8 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
KHDC1LQ5JSQ8 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
KHDC1LQ5JSQ8 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
KHDC1LQ5JSQ8 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC22.52■■□□□ 1.2
KHDC1LQ5JSQ8 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.5■■□□□ 1.19
KHDC1LQ5JSQ8 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
KHDC1LQ5JSQ8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.47■■□□□ 1.19
KHDC1LQ5JSQ8 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.47■■□□□ 1.19
KHDC1LQ5JSQ8 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
KHDC1LQ5JSQ8 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
KHDC1LQ5JSQ8 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
KHDC1LQ5JSQ8 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
KHDC1LQ5JSQ8 AL031258.1-201ENST00000623562 325 ntBASIC22.43■■□□□ 1.18
KHDC1LQ5JSQ8 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.41■■□□□ 1.18
KHDC1LQ5JSQ8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
KHDC1LQ5JSQ8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC22.39■■□□□ 1.17
KHDC1LQ5JSQ8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC22.39■■□□□ 1.17
KHDC1LQ5JSQ8 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
KHDC1LQ5JSQ8 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.33■■□□□ 1.17
KHDC1LQ5JSQ8 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KHDC1LQ5JSQ8 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.28■■□□□ 1.16
KHDC1LQ5JSQ8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC22.28■■□□□ 1.16
KHDC1LQ5JSQ8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC22.28■■□□□ 1.16
KHDC1LQ5JSQ8 AC145285.7-201ENST00000614819 1539 ntBASIC22.27■■□□□ 1.16
KHDC1LQ5JSQ8 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KHDC1LQ5JSQ8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
KHDC1LQ5JSQ8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC22.26■■□□□ 1.15
KHDC1LQ5JSQ8 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
KHDC1LQ5JSQ8 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.24■■□□□ 1.15
KHDC1LQ5JSQ8 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
KHDC1LQ5JSQ8 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.22■■□□□ 1.15
KHDC1LQ5JSQ8 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
KHDC1LQ5JSQ8 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.2■■□□□ 1.14
KHDC1LQ5JSQ8 RARRES2P7-201ENST00000567349 469 ntBASIC22.2■■□□□ 1.14
KHDC1LQ5JSQ8 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC22.2■■□□□ 1.14
KHDC1LQ5JSQ8 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC22.2■■□□□ 1.14
KHDC1LQ5JSQ8 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
KHDC1LQ5JSQ8 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
KHDC1LQ5JSQ8 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.17■■□□□ 1.14
KHDC1LQ5JSQ8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
KHDC1LQ5JSQ8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC22.17■■□□□ 1.14
KHDC1LQ5JSQ8 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
KHDC1LQ5JSQ8 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
KHDC1LQ5JSQ8 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
KHDC1LQ5JSQ8 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
KHDC1LQ5JSQ8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
KHDC1LQ5JSQ8 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
KHDC1LQ5JSQ8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
KHDC1LQ5JSQ8 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KHDC1LQ5JSQ8 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
KHDC1LQ5JSQ8 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
KHDC1LQ5JSQ8 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.08■■□□□ 1.13
KHDC1LQ5JSQ8 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
KHDC1LQ5JSQ8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
KHDC1LQ5JSQ8 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
KHDC1LQ5JSQ8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC22.04■■□□□ 1.12
KHDC1LQ5JSQ8 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
KHDC1LQ5JSQ8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC22.03■■□□□ 1.12
KHDC1LQ5JSQ8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC22.02■■□□□ 1.12
KHDC1LQ5JSQ8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.01■■□□□ 1.11
KHDC1LQ5JSQ8 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC22■■□□□ 1.11
KHDC1LQ5JSQ8 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
KHDC1LQ5JSQ8 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
KHDC1LQ5JSQ8 SETD8P1-201ENST00000623146 1180 ntBASIC21.98■■□□□ 1.11
KHDC1LQ5JSQ8 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
KHDC1LQ5JSQ8 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
KHDC1LQ5JSQ8 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
KHDC1LQ5JSQ8 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
KHDC1LQ5JSQ8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.94■■□□□ 1.1
KHDC1LQ5JSQ8 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC21.94■■□□□ 1.1
KHDC1LQ5JSQ8 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
KHDC1LQ5JSQ8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
KHDC1LQ5JSQ8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC21.94■■□□□ 1.1
KHDC1LQ5JSQ8 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
KHDC1LQ5JSQ8 AC097358.2-201ENST00000607541 1159 ntBASIC21.93■■□□□ 1.1
KHDC1LQ5JSQ8 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.92■■□□□ 1.1
KHDC1LQ5JSQ8 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
KHDC1LQ5JSQ8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.91■■□□□ 1.1
KHDC1LQ5JSQ8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
KHDC1LQ5JSQ8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.9■■□□□ 1.1
KHDC1LQ5JSQ8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC21.9■■□□□ 1.1
KHDC1LQ5JSQ8 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
KHDC1LQ5JSQ8 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms